RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SLC12A2P55011 1212 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 CACNG1Q06432 222 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.361e-11■■■■□ 20.2
SRSF1-201ENST00000258962 DBN1Q16643 649 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 HNRNPA1L2Q32P51 320 aaKnown RBP17.32■□□□□ 0.36
SRSF1-201ENST00000258962 BRAT1Q6PJG6 821 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 FAM151BQ6UXP7 276 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 PIM3Q86V86 326 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 KBTBD6Q86V97 674 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 NUDCD3Q8IVD9 361 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 TMEM151AQ8N4L1 468 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 CCDC63Q8NA47 563 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 GRAMD1AQ96CP6 724 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 PITPNM3Q9BZ71 974 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 MKRN2Q9H000 416 aaKnown RBP17.32■□□□□ 0.36
SRSF1-201ENST00000258962 SLC6A17Q9H1V8 727 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 PRSS16Q9NQE7 514 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 COPG2Q9UBF2 871 aa17.32■□□□□ 0.36
SRSF1-201ENST00000258962 EDDM13A0A1B0GTR0 161 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 UBA6A0AVT1 1052 aaPredicted RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 RNASEH1O60930 286 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 NDUFS3O75489 264 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SRP72O76094 671 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 C1SP09871 688 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SBK3P0C264 359 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CA5AP35218 305 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 TTPAP49638 278 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SUOXP51687 545 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 PTSQ03393 145 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CHI3L2Q15782 390 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 TMEM207Q6UWW9 146 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CACNA2D3Q8IZS8 1091 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 STK40Q8N2I9 435 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CBARPQ8N350 705 aaPredicted RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 FAM160A2Q8N612 972 aaPredicted RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 ZC3H10Q96K80 434 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 PLCD4Q9BRC7 762 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 NMRAL1Q9HBL8 299 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 IGSF5Q9NSI5 407 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 DKK3Q9UBP4 350 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 RUVBL2Q9Y230 463 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 MED16Q9Y2X0 877 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SLC30A1Q9Y6M5 507 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 GPR179Q6PRD1 2367 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 UPK3BL1B0FP48 263 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 UPK3BL2E5RIL1 263 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 G3V2L1 256 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 KLHL2O95198 593 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 PRAMEF1O95521 474 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 FGF3P11487 239 aaPredicted RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 NEFHP12036 1026 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CPA3P15088 417 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 TIMP2P16035 220 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 KCNA4P22459 653 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 HNRNPH2P55795 449 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 POLR2LP62875 67 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 MAP7D1Q3KQU3 841 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 PLK5Q496M5 336 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 ZNF805Q5CZA5 627 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 AARS2Q5JTZ9 985 aaKnown RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 RNF187Q5TA31 235 aaPredicted RBP17.31■□□□□ 0.36
SRSF1-201ENST00000258962 LRRC8EQ6NSJ5 796 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SLC36A4Q6YBV0 504 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 RFLNAQ6ZTI6 216 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 C10orf107Q8IVU9 208 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 TRIM42Q8IWZ5 723 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 LOXL4Q96JB6 756 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 BIRC8Q96P09 236 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 GPAMQ9HCL2 828 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 CYP8B1Q9UNU6 501 aa17.31■□□□□ 0.36
SRSF1-201ENST00000258962 LRRK1Q38SD2 2015 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 FAM186AA6NE01 2351 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 EP300Q09472 2414 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TRBV5-4A0A0C4DH59 114 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TARM1B6A8C7 271 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TK2O00142 265 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 OR1I1O60431 355 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 RETP07949 1114 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 FMO4P31512 558 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 SPAM1P38567 509 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 GLRBP48167 497 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 COPAP53621 1224 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 BST1Q10588 318 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 SETMARQ53H47 684 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 ZNF776Q68DI1 518 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 ZCCHC23Q6ZST2 131 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 LPCAT2Q7L5N7 544 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TAS2R42Q7RTR8 314 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 FSTL5Q8N475 847 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 GPR26Q8NDV2 337 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 RAB3IL1Q8TBN0 382 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms