RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ARSAP15289 507 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 NNMTP40261 264 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 SH2D4BQ5SQS7 431 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 GDPD4Q6W3E5 623 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 RINLQ6ZS11 566 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 SIDT2Q8NBJ9 832 aaKnown RBP27.43■■□□□ 1.98
CCM2-201ENST00000258781 CHST14Q8NCH0 376 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 FRS2Q8WU20 508 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 OR52B2Q96RD2 323 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 SLC30A3Q99726 388 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 CLPBQ9H078 707 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 EBF3Q9H4W6 596 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 OBP2AQ9NY56 170 aa27.43■■□□□ 1.98
CCM2-201ENST00000258781 OTOL1A6NHN0 477 aaPredicted RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 SYCE1LA8MT33 242 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 TRIM24O15164 1050 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 TSPAN12O95859 305 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 ASLP04424 464 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 MTHFD2P13995 350 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 IL2P60568 153 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 POLR2LP62875 67 aaKnown RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 TEX9Q8N6V9 391 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 PTGR2Q8N8N7 351 aaPredicted RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 GIMAP7Q8NHV1 300 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 NUF2Q9BZD4 464 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 PLA2G2FQ9BZM2 168 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 TAS2R1Q9NYW7 299 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 RNF112Q9ULX5 631 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 CDYLQ9Y232 598 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 UBXN8O00124 270 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 CISD3P0C7P0 127 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 LAMP2P13473 410 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 NCF2P19878 526 aaPredicted RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 CHRM3P20309 590 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 ACRV1P26436 265 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 DGKGP49619 791 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 UNC50Q53HI1 259 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 LRRC66Q68CR7 880 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 FGF14Q92915 247 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 EXT2Q93063 718 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 ASB2Q96Q27 587 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 GAS2L1Q99501 681 aaPredicted RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 FAM83CQ9BQN1 747 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 HEPHQ9BQS7 1158 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 CADM1Q9BY67 442 aaKnown RBP27.42■■□□□ 1.98
CCM2-201ENST00000258781 GNPTGQ9UJJ9 305 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 SLC8A2Q9UPR5 921 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 DHRS7Q9Y394 339 aa27.42■■□□□ 1.98
CCM2-201ENST00000258781 H3BQ06 376 aaPredicted RBP27.41■■□□□ 1.98
CCM2-201ENST00000258781 ATP6V1G2O95670 118 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 SRPRAP08240 638 aaKnown RBP27.41■■□□□ 1.98
CCM2-201ENST00000258781 MTHFRP42898 656 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 CLCN7P51798 805 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 CHRNA6Q15825 494 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 ZDHHC20Q5W0Z9 365 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 BRAT1Q6PJG6 821 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 CUZD1Q86UP6 607 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 BRD9Q9H8M2 597 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 TMCO1Q9UM00 188 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 SLC27A6Q9Y2P4 619 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 PLXNB3Q9ULL4 1909 aa27.41■■□□□ 1.98
CCM2-201ENST00000258781 AGAP14A8MT82 685 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 E9PBE3 544 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 KLHL41O60662 606 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 TSNQ15631 228 aaKnown RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 SNCBQ16143 134 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 PARM1Q6UWI2 310 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 TMPRSS6Q8IU80 811 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 PDLIM5Q96HC4 596 aaKnown RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 KXD1Q9BQD3 176 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 WDR55Q9H6Y2 383 aaPredicted RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 CRLS1Q9UJA2 301 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 B2RBV5 119 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 GSC2O15499 205 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 SUPT7LO94864 414 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 CHRM1P11229 460 aaPredicted RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 PRDX6P30041 224 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 SATB1Q01826 763 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 KDSRQ06136 332 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 FCHO2Q0JRZ9 810 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 LSM12Q3MHD2 195 aaKnown RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 C12orf40Q86WS4 652 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 CYB5D2Q8WUJ1 264 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 LINGO1Q96FE5 620 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 MAELQ96JY0 434 aaKnown RBP27.4■■□□□ 1.98
CCM2-201ENST00000258781 KLHL32Q96NJ5 620 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 IKZF3Q9UKT9 509 aa27.4■■□□□ 1.98
CCM2-201ENST00000258781 TSPAN11A1L157 253 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 A8MX80 341 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 SUPT3HB4E1H0 165 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 BTN3A1O00481 513 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 SUPT3HO75486 399 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 GFAPP14136 432 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 LHCGRP22888 699 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 MNAT1P51948 309 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 NAA20P61599 178 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 GRM2Q14416 872 aa27.39■■□□□ 1.98
CCM2-201ENST00000258781 PDCD2Q16342 344 aaPredicted RBP27.39■■□□□ 1.98
CCM2-201ENST00000258781 PTRHD1Q6GMV3 140 aaKnown RBP27.39■■□□□ 1.98
CCM2-201ENST00000258781 NXPE1Q8N323 547 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms