RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
USP30-201ENST00000257548 IRF2BPLQ9H1B7 796 aa12.25□□□□□ -0.45
USP30-201ENST00000257548 NXF3Q9H4D5 531 aaKnown RBP12.25□□□□□ -0.45
USP30-201ENST00000257548 FZD10Q9ULW2 581 aa12.25□□□□□ -0.45
USP30-201ENST00000257548 POLR3HQ9Y535 204 aaPredicted RBP12.25□□□□□ -0.45
USP30-201ENST00000257548 AIREO43918 545 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TOMM70O94826 608 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 RASAL1O95294 804 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 C1QAP02745 245 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CYBBP04839 570 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 LRRC74AQ0VAA2 488 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TP53BP2Q13625 1128 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 STEAP4Q687X5 459 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ZDHHC17Q8IUH5 632 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 FRS2Q8WU20 508 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 NUDT8Q8WV74 236 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLC35F5Q8WV83 523 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLC47A1Q96FL8 570 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 DPY30Q9C005 99 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 DCSTAMPQ9H295 470 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TMEM9Q9P0T7 183 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ERVK-18Q9QC07 812 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CNOT11Q9UKZ1 510 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 KLHL20Q9Y2M5 609 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 KCTD3Q9Y597 815 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLX4Q8IY92 1834 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TCRBV3S1A0A5B6 114 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ILVBLA1L0T0 632 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ARVCFO00192 962 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SEC22BO75396 215 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CNTN5O94779 1100 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLC2A3P11169 496 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 FSHRP23945 695 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 MED22Q15528 200 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 DDR2Q16832 855 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLC36A3Q495N2 470 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ANKRD34AQ69YU3 496 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SPATC1Q76KD6 591 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 STRADAQ7RTN6 431 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TRIM48Q8IWZ4 208 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 B3GALNT2Q8NCR0 500 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 AFG1LQ8WV93 481 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 STON2Q8WXE9 905 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TEKT5Q96M29 485 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ALPK1Q96QP1 1244 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CYP2S1Q96SQ9 504 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TNFRSF12AQ9NP84 129 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 GALPQ9UBC7 116 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ERVK-11Q9UQG0 969 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CARD8Q9Y2G2 431 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TBC1D30Q9Y2I9 924 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 WBP11Q9Y2W2 641 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 SMIM30A4D0T7 59 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 CPSF4O95639 269 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 MZF1P28698 734 aaPredicted RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 SERPINH1P50454 418 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 MXD1Q05195 221 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TSNQ15631 228 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 NDUFA5Q16718 116 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 TBPL2Q6SJ96 375 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 PLEKHG7Q6ZR37 379 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 EPHX4Q8IUS5 362 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ANKRD49Q8WVL7 239 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 ATL1Q8WXF7 558 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 RTP4Q96DX8 246 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 AURKBQ96GD4 344 aaPredicted RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 MLPHQ9BV36 600 aaPredicted RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
USP30-201ENST00000257548 DNAJC15Q9Y5T4 150 aa12.24□□□□□ -0.45
USP30-201ENST00000257548 SLC22A2O15244 555 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 PSMD3O43242 534 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 GUCY1B2O75343 617 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 OR4F21O95013 312 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 HLA-DPA1P20036 260 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 IGFBP5P24593 272 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
USP30-201ENST00000257548 RAD51Q06609 339 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 CD47Q08722 323 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 GALNT3Q14435 633 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 MARC1Q5VT66 337 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 DENND5AQ6IQ26 1287 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 EFL1Q7Z2Z2 1120 aaKnown RBP12.23□□□□□ -0.45
USP30-201ENST00000257548 ADGRG5Q8IZF4 528 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 PACRGLQ8N7B6 248 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 PDPRQ8NCN5 879 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 SPPL2AQ8TCT8 520 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 COLEC11Q9BWP8 271 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 NANOGQ9H9S0 305 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 ADPRHL2Q9NX46 363 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 SAMHD1Q9Y3Z3 626 aaKnown RBP12.23□□□□□ -0.45
USP30-201ENST00000257548 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
USP30-201ENST00000257548 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 ZSCAN5BA6NJL1 495 aa12.23□□□□□ -0.45
USP30-201ENST00000257548 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
USP30-201ENST00000257548 NPR3P17342 541 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms