RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 HP1BP3Q5SSJ5 553 aaPredicted RBP13.96□□□□□ -0.17
VPS25-201ENST00000253794 MRNIPQ6NTE8 343 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 LAYNQ6UX15 382 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 KIAA0408Q6ZU52 694 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 ADGRG6Q86SQ4 1221 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 KCNMB4Q86W47 210 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 CILP2Q8IUL8 1156 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 PALM2Q8IXS6 379 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 CALML6Q8TD86 181 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 CFAP36Q96G28 342 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 TTC1Q99614 292 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 COPS8Q99627 209 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 FAM167BQ9BTA0 163 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 ZCCHC2Q9C0B9 1178 aaKnown RBP13.96□□□□□ -0.17
VPS25-201ENST00000253794 FGF22Q9HCT0 170 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 C20orf96Q9NUD7 363 aaPredicted RBP13.96□□□□□ -0.17
VPS25-201ENST00000253794 NINJ2Q9NZG7 142 aa13.96□□□□□ -0.17
VPS25-201ENST00000253794 PNMA8BQ9ULN7 279 aaPredicted RBP13.96□□□□□ -0.17
VPS25-201ENST00000253794 PATE3B3GLJ2 98 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 KHNYNO15037 678 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 NUAK1O60285 661 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 CSF2P04141 144 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 SYPP08247 313 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 FAM153BP0C7A2 387 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 TGM1P22735 817 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 NSG1P42857 185 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 B4GALNT1Q00973 533 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 CSRP2Q16527 193 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 FAM153CQ494X1 144 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 RNF187Q5TA31 235 aaPredicted RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 TRMT10BQ6PF06 316 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 MICALCLQ6ZW33 695 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 TRMT10CQ7L0Y3 403 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 TRIM74Q86UV6 250 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 RBFAQ8N0V3 343 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 GABPB2Q8TAK5 448 aaPredicted RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 ZNF514Q96K75 400 aaPredicted RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 C9orf72Q96LT7 481 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 CDC42EP4Q9H3Q1 356 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 FAM96AQ9H5X1 160 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 INTS10Q9NVR2 710 aaKnown RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 ATXN10Q9UBB4 475 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS25-201ENST00000253794 GPR34Q9UPC5 381 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 VPS9D1Q9Y2B5 631 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 SNX11Q9Y5W9 270 aa13.95□□□□□ -0.18
VPS25-201ENST00000253794 V9GYY5 206 aaPredicted RBP13.95□□□□□ -0.18
VPS25-201ENST00000253794 ZNF292O60281 2723 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 TCRBV9S1A1TA0A576 114 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 PRSS38A1L453 326 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 CFAP99D6REC4 459 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 QSOX1O00391 747 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 YKT6O15498 198 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 CTIFO43310 598 aaKnown RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 SGTAO43765 313 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 AP2A2O94973 939 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 FUCA1P04066 466 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 CFIP05156 583 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 ABHD2P08910 425 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 RALBP11234 206 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 RPS3P23396 243 aaKnown RBP eCLIP13.94□□□□□ -0.187e-7■■■■■ 46
VPS25-201ENST00000253794 SSTR1P30872 391 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 BLKP51451 505 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 HK3P52790 923 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 SRP54P61011 504 aaKnown RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 IRX4P78413 519 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 MGAT5Q09328 741 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 KYNUQ16719 465 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 BCL7AQ4VC05 210 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 HSP90AA5PQ58FG0 334 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 TEDDM1Q5T9Z0 273 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 C3orf62Q6ZUJ4 267 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 TAS2R42Q7RTR8 314 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 SDCCAG8Q86SQ7 713 aaPredicted RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 SLC26A11Q86WA9 606 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 UNC5BQ8IZJ1 945 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 C2CD4AQ8NCU7 369 aaPredicted RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 AENQ8WTP8 325 aaKnown RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 LPGAT1Q92604 370 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 PDXPQ96GD0 296 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 LINC00615Q96LM1 132 aaPredicted RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 ELF4Q99607 663 aaPredicted RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 SEMA4GQ9NTN9 838 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
VPS25-201ENST00000253794 PI4KAP42356 2102 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 LRP4O75096 1905 aa13.94□□□□□ -0.18
VPS25-201ENST00000253794 A0A1B0GTQ1 180 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 LNP1A1A4G5 178 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 KLHL33A6NCF5 533 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms