RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 UGT3A2Q3SY77 523 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TLK2Q86UE8 772 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 RAVER1Q8IY67 606 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LZTR1Q8N653 840 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TOP6BLQ8N6T0 577 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 FAM86B1Q8N7N1 296 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 LPCAT1Q8NF37 534 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 OR6K2Q8NGY2 324 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TBC1D15Q8TC07 691 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 ABCB10Q9NRK6 738 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 HS3ST4Q9Y661 456 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 FMO3P31513 532 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 NKX2-5P52952 324 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-201ENST00000252597 TMEM236Q5W0B7 351 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 RANBP10Q6VN20 620 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 SLCO6A1Q86UG4 719 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 OR13J1Q8NGT2 312 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 PSMA8Q8TAA3 256 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 CATSPERZQ9NTU4 200 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 PCDHGC4Q9Y5F7 938 aa11.88□□□□□ -0.51
USHBP1-201ENST00000252597 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SLC12A8A0AV02 714 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 DEAF1O75398 565 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 S1PR4O95977 384 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 BMP2P12643 396 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 WARSP23381 471 aaKnown RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 HTR6P50406 440 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SEMA3AQ14563 771 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 PTGR1Q14914 329 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 CCL15Q16663 113 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 BROXQ5VW32 411 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 CXCL17Q6UXB2 119 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 CYHR1Q6ZMK1 362 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 C8orf59Q8N0T1 100 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ARL10Q8N8L6 244 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ATAD1Q8NBU5 361 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SNX19Q92543 992 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 MAELQ96JY0 434 aaKnown RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SLC9A7Q96T83 725 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 AP5M1Q9H0R1 490 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 TOR3AQ9H497 397 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 NOL6Q9H6R4 1146 aaKnown RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ACTR3BQ9P1U1 418 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 SLC22A2O15244 555 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ECI2O75521 394 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 INMTO95050 263 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 BMP10O95393 424 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 NADKO95544 446 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 TCF3P15923 654 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF37AP17032 561 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 GJA5P36382 358 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 OPRL1P41146 370 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 HK2P52789 917 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ZNF829Q3KNS6 432 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ANKRD26P1Q6NSI1 321 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ANGPTL8Q6UXH0 198 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ZCCHC7Q8N3Z6 543 aaKnown RBP11.87□□□□□ -0.51
USHBP1-201ENST00000252597 CNIH3Q8TBE1 160 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 AGPAT4Q9NRZ5 378 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 MYO7AQ13402 2215 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
USHBP1-201ENST00000252597 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 G3V2T6 193 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 H0Y626 953 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 H0Y858 1186 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CXCL11O14625 94 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 SNAP91O60641 907 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RAMP2O60895 175 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CBFA2T3O75081 653 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TRIM16O95361 564 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 CAPN1P07384 714 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 THRBP10828 461 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 IRF1P10914 325 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 G6PDP11413 515 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RFC2P35250 354 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TUBA4AP68366 448 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 RAD51Q06609 339 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TNK2Q07912 1038 aa11.86□□□□□ -0.51
USHBP1-201ENST00000252597 TSTA3Q13630 321 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-201ENST00000252597 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms