RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PDK2Q15119 407 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 HADHQ16836 314 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 CCDC122Q5T0U0 273 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 ANKS6Q68DC2 871 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 CAVIN1Q6NZI2 390 aaKnown RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 IYDQ6PHW0 289 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 ATG14Q6ZNE5 492 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 LYSMD3Q7Z3D4 306 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 PLD5Q8N7P1 536 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 LPCAT1Q8NF37 534 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 OR10G6Q8NH81 332 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 TADA1Q96BN2 335 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 IQCDQ96DY2 449 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 SLC45A3Q96JT2 553 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 HERPUD2Q9BSE4 406 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 TRIM4Q9C037 500 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 SLC25A18Q9H1K4 315 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 IL17BQ9UHF5 180 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 TUBD1Q9UJT1 453 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 PRKAB1Q9Y478 270 aa10.2□□□□□ -0.78
VPS50-201ENST00000251739 TMEM184BQ9Y519 407 aaPredicted RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 HEMK1Q9Y5R4 338 aaPredicted RBP10.2□□□□□ -0.78
VPS50-201ENST00000251739 NBPF19A0A087WUL8 3843 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 KIR2DS5A0A0G2JLQ3 304 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 A0A0G2JNG1 304 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ESPNB1AK53 854 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ZNF487B1APH4 448 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ANKRD66B4E2M5 251 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 KIR2DS3K7RE56 304 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
VPS50-201ENST00000251739 NUAK1O60285 661 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 RAD1O60671 282 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 DLGAP3O95886 979 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 SERPINC1P01008 464 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ANKRD34CP0C6C1 535 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ACP5P13686 325 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 MX2P20592 715 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 MAN1A1P33908 653 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 SOX11P35716 441 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 DCDC1P59894 354 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ITKQ08881 620 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 KIR2DS5Q14953 304 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ASTE1Q2TB18 679 aaPredicted RBP10.19□□□□□ -0.78
VPS50-201ENST00000251739 DCAF12Q5T6F0 453 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 BORAQ6PGQ7 559 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 CHST15Q7LFX5 561 aaPredicted RBP10.19□□□□□ -0.78
VPS50-201ENST00000251739 TIPARPQ7Z3E1 657 aaKnown RBP10.19□□□□□ -0.78
VPS50-201ENST00000251739 VSIG1Q86XK7 387 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 FAM129CQ86XR2 697 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 CACNA2D3Q8IZS8 1091 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS50-201ENST00000251739 IL22RA1Q8N6P7 574 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 HPS1Q92902 700 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 OLFM3Q96PB7 478 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 CARD9Q9H257 536 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 EPB41L1Q9H4G0 881 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 FAM83DQ9H4H8 585 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 UCK1Q9HA47 277 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 CBX8Q9HC52 389 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 FBXO8Q9NRD0 319 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 UVRAGQ9P2Y5 699 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 KCNK6Q9Y257 313 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 TTLL3Q9Y4R7 772 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
VPS50-201ENST00000251739 UNC79Q9P2D8 2635 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 TRBV23OR9-2A0A075B6M9 112 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 C3orf70A6NLC5 250 aaPredicted RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 OR5K4A6NMS3 321 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 GPR89AB7ZAQ6 455 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 KCNK1O00180 336 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 CHUKO15111 745 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 ASMTLO95671 621 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 JCHAINP01591 159 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 C9P02748 559 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 KRT7P08729 469 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 GPR89BP0CG08 455 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 SLC2A4P14672 509 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 GJC1P36383 396 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 CD86P42081 329 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 POLE2P56282 527 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 SLC14A2Q15849 920 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 CRTC2Q53ET0 693 aaPredicted RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 PDPK2PQ6A1A2 396 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 SLC9A4Q6AI14 798 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 LUZP1Q86V48 1076 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 CCDC13Q8IYE1 715 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 NLGN4XQ8N0W4 816 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 AVL9Q8NBF6 648 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 KCTD6Q8NC69 237 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 GPR26Q8NDV2 337 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 NLGN4YQ8NFZ3 816 aaPredicted RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 RAPGEF5Q92565 580 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 SH3KBP1Q96B97 665 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 IMP4Q96G21 291 aaKnown RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 RNF157Q96PX1 679 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 ZPBPQ9BS86 351 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 MLPHQ9BV36 600 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms