RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ZNF821O75541 412 aaPredicted RBP21.47■■□□□ 1.03
CLN6-201ENST00000249806 CLDN7O95471 211 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 PRAMEF1O95521 474 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 AQP4P55087 323 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 RALGDSQ12967 914 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 SYVN1Q86TM6 617 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 PQLC1Q8N2U9 271 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 DCBLD1Q8N8Z6 715 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 GATA6Q92908 595 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 KLHL32Q96NJ5 620 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 SLC39A3Q9BRY0 314 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 HGH1Q9BTY7 390 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 CD274Q9NZQ7 290 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 INTS6Q9UL03 887 aaKnown RBP21.47■■□□□ 1.03
CLN6-201ENST00000249806 TRIM38O00635 465 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 STX16O14662 325 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 PRMT5O14744 637 aaPredicted RBP21.47■■□□□ 1.03
CLN6-201ENST00000249806 CRCPO75575 148 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 HGFP14210 728 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 RFC2P35250 354 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 ACADVLP49748 655 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 ATP4BP51164 291 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 SEMG2Q02383 582 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 DGKKQ5KSL6 1271 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 OTOP2Q7RTS6 562 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 SERPINA9Q86WD7 417 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 ACDQ96AP0 544 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 SLC45A3Q96JT2 553 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 PLEKHG4BQ96PX9 1271 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 ZBP1Q9H171 429 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.47■■□□□ 1.03
CLN6-201ENST00000249806 SARDHQ9UL12 918 aa21.47■■□□□ 1.03
CLN6-201ENST00000249806 A0A0J9YYE9 177 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 TRIM43BA6NCK2 446 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 PRORSD1PA6NEY8 169 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 CASQ2O14958 399 aaPredicted RBP21.46■■□□□ 1.03
CLN6-201ENST00000249806 SNX2O60749 519 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 TRBC1P01850 177 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 LRG1P02750 347 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 ITGB6P18564 788 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 HNF1BP35680 557 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 TGFBIQ15582 683 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 SCIMPQ6UWF3 145 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 FIBCD1Q8N539 461 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 ZNF483Q8TF39 744 aaPredicted RBP21.46■■□□□ 1.03
CLN6-201ENST00000249806 TRIM43Q96BQ3 446 aaPredicted RBP21.46■■□□□ 1.03
CLN6-201ENST00000249806 LRCH3Q96II8 777 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 C1QTNF3Q9BXJ4 246 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 ASB8Q9H765 288 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 DLGAP2Q9P1A6 1054 aa21.46■■□□□ 1.03
CLN6-201ENST00000249806 EIF2B4Q9UI10 523 aaKnown RBP21.46■■□□□ 1.03
CLN6-201ENST00000249806 UBTFL6P0CB48 400 aaPredicted RBP21.45■■□□□ 1.03
CLN6-201ENST00000249806 UGT1A6P19224 532 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 UGT1A1P22309 533 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 UGT1A4P22310 534 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 UGT1A3P35503 534 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 UGT1A5P35504 534 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 CTSOP43234 321 aaPredicted RBP21.45■■□□□ 1.03
CLN6-201ENST00000249806 SLC7A9P82251 487 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 RBBP7Q16576 425 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 LRRC26Q2I0M4 334 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 RETREG3Q86VR2 466 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 ZSWIM9Q86XI8 627 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 STK40Q8N2I9 435 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 CLDN19Q8N6F1 224 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 CIPCQ9C0C6 399 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 IL26Q9NPH9 171 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 TLR9Q9NR96 1032 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 DHRS7Q9Y394 339 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 ASB3Q9Y575 518 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 KIAA1671Q9BY89 1806 aa21.45■■□□□ 1.03
CLN6-201ENST00000249806 HTRA2O43464 458 aaPredicted RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 LBPP18428 481 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 STK19P49842 368 aaPredicted RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 TRIM25Q14258 630 aaKnown RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 C18orf21Q32NC0 220 aaPredicted RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 PLEKHG6Q3KR16 790 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 GRAMD1BQ3KR37 738 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 VPS26BQ4G0F5 336 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 MPPE1Q53F39 396 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 TXNDC11Q6PKC3 985 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 SPATA24Q86W54 205 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 CMTM8Q8IZV2 173 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 ACOX2Q99424 681 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 SLC46A2Q9BY10 475 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 COPS7BQ9H9Q2 264 aaPredicted RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 SPAG4Q9NPE6 437 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 KIAA1522Q9P206 1035 aaPredicted RBP21.45■■□□□ 1.02
CLN6-201ENST00000249806 BCAP29Q9UHQ4 241 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 COMMD10Q9Y6G5 202 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 PRSS21Q9Y6M0 314 aa21.45■■□□□ 1.02
CLN6-201ENST00000249806 LEFTY2O00292 366 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 NR5A2O00482 541 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 E2F3O00716 465 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 TRIM24O15164 1050 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 BNIP3LO60238 219 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 ESRRBO95718 433 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 C8AP07357 584 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 CTSAP10619 480 aa21.44■■□□□ 1.02
CLN6-201ENST00000249806 PSMD8P48556 350 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms