RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 UGT1A9O60656 530 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 KCNJ13O60928 360 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 ECEL1O95672 775 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 ACP5P13686 325 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A6P19224 532 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A1P22309 533 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A4P22310 534 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A3P35503 534 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A5P35504 534 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 PTPRCAPQ14761 206 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 ZNF648Q5T619 568 aaPredicted RBP24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 ULK4Q96C45 1275 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 TIMM29Q9BSF4 260 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A7Q9HAW7 530 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A10Q9HAW8 530 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 UGT1A8Q9HAW9 530 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 EIF2B3Q9NR50 452 aaKnown RBP24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 PRKAB1Q9Y478 270 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 KCTD3Q9Y597 815 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 PCYT1BQ9Y5K3 369 aaPredicted RBP24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 AP3B1O00203 1094 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 MTX2O75431 263 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 TPH1P17752 444 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 TCP1P17987 556 aaKnown RBP24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 KCNJ1P48048 391 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 CLDN6P56747 220 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 XIAPP98170 497 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 BIRC2Q13490 618 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 SPIDRQ14159 915 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 RBM44Q6ZP01 1051 aaKnown RBP24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 ARL14Q8N4G2 192 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 GLIS1Q8NBF1 620 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 OR52K1Q8NGK4 314 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 OR13C4Q8NGS5 318 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 ZNF514Q96K75 400 aaPredicted RBP24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 NRSN2Q9GZP1 204 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 NLE1Q9NVX2 485 aaPredicted RBP24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 DNMT3AQ9Y6K1 912 aaPredicted RBP24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 SLC30A1Q9Y6M5 507 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 RNF215Q9Y6U7 377 aa24.03■■□□□ 1.44
SDF2L1-201ENST00000248958 OR5K4A6NMS3 321 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 RHPN2P1A8MT19 583 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 AGAP14A8MT82 685 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 NTN3O00634 580 aaPredicted RBP24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 APRTP07741 180 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 ZSCAN5DPP0CG00 497 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 ZNF7P17097 686 aaPredicted RBP24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 VCLP18206 1134 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 ITGALP20701 1170 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 NFATC2Q13469 925 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 POU6F1Q14863 301 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 CYP1B1Q16678 543 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 INSCQ1MX18 579 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 GPR33Q49SQ1 333 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 GPRC6AQ5T6X5 926 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 PRUNE1Q86TP1 453 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 KDF1Q8NAX2 398 aaPredicted RBP24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 AVL9Q8NBF6 648 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 HEXDCQ8WVB3 486 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 MAGOHBQ96A72 148 aaKnown RBP24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 MS4A14Q96JA4 679 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 LRRN3Q9H3W5 708 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 CASS4Q9NQ75 786 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 KCNK6Q9Y257 313 aa24.02■■□□□ 1.44
SDF2L1-201ENST00000248958 COL27A1Q8IZC6 1860 aaPredicted RBP24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 KNTC1P50748 2209 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 GOLGA6L10A0A0M3HER8 536 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 HEATR9A2RTY3 570 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 TRABD2BA6NFA1 517 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 USP27XA6NNY8 438 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 MSH3P20585 1137 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 MAZP56270 477 aaKnown RBP24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 BASP1P80723 227 aaKnown RBP24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 SEPT6Q14141 434 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 NR1D2Q14995 579 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 SKIDA1Q1XH10 827 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 KHDC1Q4VXA5 237 aaKnown RBP24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 CRTC3Q6UUV7 619 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 ZNF438Q7Z4V0 828 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 SNX20Q7Z614 316 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 MARCH9Q86YJ5 346 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 CCNJLQ8IV13 435 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 NXPE2Q96DL1 559 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 RANBP9Q96S59 729 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 STN1Q9H668 368 aaKnown RBP24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 KLC4Q9NSK0 619 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 DKK4Q9UBT3 224 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 RABGEF1Q9UJ41 708 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 CRLS1Q9UJA2 301 aa24.01■■□□□ 1.43
SDF2L1-201ENST00000248958 KIR2DS5A0A0G2JLQ3 304 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 A0A0G2JNG1 304 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 MROH6A6NGR9 719 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 KIR2DS3K7RE56 304 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 CSO75390 466 aaKnown RBP24■■□□□ 1.43
SDF2L1-201ENST00000248958 RALBP11234 206 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 F3P13726 295 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 PSMA3P25788 255 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 GPR3P46089 330 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 FASLGP48023 281 aa24■■□□□ 1.43
SDF2L1-201ENST00000248958 GNG11P61952 73 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms