RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 AARS2Q5JTZ9 985 aaKnown RBP23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 SH2D4BQ5SQS7 431 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 ZNF678Q5SXM1 525 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 IL26Q9NPH9 171 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 VTI1BQ9UEU0 232 aa23.16■■□□□ 1.3
SYNGR3-201ENST00000248121 F8W8V4 182 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 UBXN8O00124 270 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 CTSLP07711 333 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 NCF2P19878 526 aaPredicted RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 CD9P21926 228 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 PTGER3P43115 390 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 LSM12Q3MHD2 195 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 UNC50Q53HI1 259 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 FAM219BQ5XKK7 198 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 GRAMD4Q6IC98 578 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 SIDT2Q8NBJ9 832 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 RBM15BQ8NDT2 890 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 CD200R1Q8TD46 325 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 EXT2Q93063 718 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 KIAA1191Q96A73 305 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 ERLEC1Q96DZ1 483 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 LYSMD1Q96S90 227 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 ELOVL2Q9NXB9 296 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 DEC1Q9P2X7 70 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 SLC30A1Q9Y6M5 507 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 ATG2BQ96BY7 2078 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 SLCO1B7G3V0H7 640 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 ARNTLO00327 626 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 UBFD1O14562 309 aaKnown RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 PRAMEF1O95521 474 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 HLA-EP13747 358 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 BPIP17213 487 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 PDCD2Q16342 344 aaPredicted RBP23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 YAF2Q8IY57 180 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 TUBGCP5Q96RT8 1024 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 SUV39H2Q9H5I1 410 aa23.15■■□□□ 1.3
SYNGR3-201ENST00000248121 IQCF5A8MTL0 148 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 SNUPNO95149 360 aaKnown RBP23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 MTHFRP42898 656 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 METTL21CQ5VZV1 264 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 CRTC1Q6UUV9 634 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 CUZD1Q86UP6 607 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 PAF1Q8N7H5 531 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 NAT14Q8WUY8 206 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 STON2Q8WXE9 905 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 C19orf43Q9BQ61 176 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 CPEB1Q9BZB8 566 aaKnown RBP23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 HCN2Q9UL51 889 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 WASF2Q9Y6W5 498 aa23.14■■□□□ 1.29
SYNGR3-201ENST00000248121 SPECC1L-ADORA2AF8WAN1 911 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 PFDN6O15212 129 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 DCXO43602 365 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 VPS26AO75436 327 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 HERVK_113P63132 956 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 RAD51Q06609 339 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 GALNT1Q10472 559 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 POU5F2Q8N7G0 328 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 PTGR2Q8N8N7 351 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 TERB1Q8NA31 727 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 WFIKKN2Q8TEU8 576 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 KCNJ9Q92806 393 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 ERVK-6Q9BXR3 956 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 FBRSL1Q9HCM7 1045 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 PPIL1Q9Y3C6 166 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 ANKRD12Q6UB98 2062 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 LRRC14BA6NHZ5 514 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 CDC7O00311 574 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 KERAO60938 352 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 ESR1P03372 595 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 PYGLP06737 847 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 TPBGLP0DKB5 382 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 CD1EP15812 388 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 POU3F3P20264 500 aaPredicted RBP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 NFATC2Q13469 925 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 TSNQ15631 228 aaKnown RBP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 POM121L1PQ3SYA9 428 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 SERPINA9Q86WD7 417 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 CPA6Q8N4T0 437 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 SUSD6Q92537 303 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 SCRN2Q96FV2 425 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 BOCQ9BWV1 1114 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 PLA2G4CQ9UP65 541 aa23.13■■□□□ 1.29
SYNGR3-201ENST00000248121 GRXCR2A6NFK2 248 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 SMIM24O75264 130 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 SUPT7LO94864 414 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 SIX3O95343 332 aaPredicted RBP23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 GM2AP17900 193 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 TSPAN8P19075 237 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 CLCN7P51798 805 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 SNX20Q7Z614 316 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 TMPRSS6Q8IU80 811 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 STK40Q8N2I9 435 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 MAELQ96JY0 434 aaKnown RBP23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 KLHL32Q96NJ5 620 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 ASB8Q9H765 288 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 TRBV5-4A0A0C4DH59 114 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 WASH3PC4AMC7 463 aa23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 PRMT5O14744 637 aaPredicted RBP23.12■■□□□ 1.29
SYNGR3-201ENST00000248121 LEFTY1O75610 366 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms