RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 AMIGO1Q86WK6 493 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-201ENST00000225964 JOSD2Q8TAC2 188 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
COL1A1-201ENST00000225964 DHRS12A0PJE2 317 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CAPGP40121 348 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 P4HA3Q7Z4N8 544 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 AMER2Q8N7J2 671 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CHST4Q8NCG5 386 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 ZHX1-C8orf76Q96EF9 292 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 A0A0J9YYE9 177 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 TSHRP16473 764 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 RIPK1Q13546 671 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 PIWIL4Q7Z3Z4 852 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CERS5Q8N5B7 392 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 POC5Q8NA72 575 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 TRAF6Q9Y4K3 522 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 OAS3Q9Y6K5 1087 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 SNAP91O60641 907 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 LAMP2P13473 410 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 MAPK12P53778 367 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 GAD2Q05329 585 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 TMPRSS11AQ6ZMR5 421 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 ARCQ7LC44 396 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 DHDDSQ86SQ9 333 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 HMCESQ96FZ2 354 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 ZDHHC4Q9NPG8 344 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 PNO1Q9NRX1 252 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 SAMD4AQ9UPU9 718 aaKnown RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 A0A075B6Q4 140 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 EPHB6O15197 1021 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 RLN1P04808 185 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 MARCKSL1P49006 195 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 DHPSP49366 369 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 DSC2Q02487 901 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 HKDC1Q2TB90 917 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-201ENST00000225964 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CAPSLQ8WWF8 208 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 INHAP05111 366 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 SLURP2P0DP57 97 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 MTHFRP42898 656 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CDH4P55283 916 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CMC1Q7Z7K0 106 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 CREG2Q8IUH2 290 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 STYXQ8WUJ0 223 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
COL1A1-201ENST00000225964 WTIPA6NIX2 430 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 CLDN9O95484 217 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 VARSP26640 1264 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 DGKGP49619 791 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 TTC27Q6P3X3 843 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 LRRC17Q8N6Y2 441 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GTF2IRD1Q9UHL9 959 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 CCDC162PA2VCL2 907 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 B3GALT2O43825 422 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 MFSD11O43934 449 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 TIE1P35590 1138 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 RHBDL3P58872 404 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 BST1Q10588 318 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 ART4Q93070 314 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PLSCR1O15162 318 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PLIN3O60664 434 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 POLR2JP52435 117 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 ADARP55265 1226 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GTF2H2Q13888 395 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PLEKHG4Q58EX7 1191 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GTF2H2CQ6P1K8 395 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 TMEM220Q6QAJ8 160 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 FAM131AQ6UXB0 335 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 XYLT1Q86Y38 959 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 KLRG1Q96E93 195 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 KLHL32Q96NJ5 620 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 HIST1H2AAQ96QV6 131 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GMEB2Q9UKD1 530 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 HBS1LQ9Y450 684 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 ZNF879B4DU55 563 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PKMP14618 531 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 CTSKP43235 329 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms