RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GSTT1P30711 240 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SSR2P43308 183 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ACAP2Q15057 778 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ZNF57Q68EA5 555 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3GQ6DHY5 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3CQ6IPX1 549 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TBC1D3Q8IZP1 549 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 FSTL5Q8N475 847 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 SCAMP5Q8TAC9 235 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SMG7Q92540 1137 aaKnown RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 CLPTM1LQ96KA5 538 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 SPRTNQ9H040 489 aaPredicted RBP11.45□□□□□ -0.58
NOD1-201ENST00000222823 TLE6Q9H808 572 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 ARHGEF3Q9NR81 526 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
NOD1-201ENST00000222823 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 SLC7A4O43246 635 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 OR10H3O60404 316 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 METTL18O95568 372 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ZNF37AP17032 561 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 BMP7P18075 431 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 C4BPBP20851 252 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RPIAP49247 311 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 PSMD7P51665 324 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RABGGTBP53611 331 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CACNG1Q06432 222 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 IL10RBQ08334 325 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 LCP2Q13094 533 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 NAE1Q13564 534 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 FBXO48Q5FWF7 155 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CPTPQ5TA50 214 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ZYG11AQ6WRX3 759 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CIR1Q86X95 450 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 TCAIMQ8N3R3 496 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 OR52L1Q8NGH7 329 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 FERD3LQ96RJ6 166 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ATG10Q9H0Y0 220 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CLN6Q9NWW5 311 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ADGRE2Q9UHX3 823 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RAB23Q9ULC3 237 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 TIPRLO75663 272 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 DNTTP04053 509 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 TCF4P15884 667 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 GSTM5P46439 218 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 MANFP55145 182 aaKnown RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 AP1S1P61966 158 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CLCQ05315 142 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ARHGAP1Q07960 439 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 IRAK1BP1Q5VVH5 260 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CLEC6AQ6EIG7 209 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 GLYATQ6IB77 296 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 PROSER1Q86XN7 944 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RERGQ96A58 199 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 AZIN2Q96A70 460 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 AP2M1Q96CW1 435 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ADI1Q9BV57 179 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CPQQ9Y646 472 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ZFP37Q9Y6Q3 630 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 U3KQV3 271 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 COL4A1P02462 1669 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 AP3D1O14617 1153 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 PDE9AO76083 593 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 TRBC1P01850 177 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RPL17P18621 184 aaKnown RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 KELP23276 732 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 CSNK2BP67870 215 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RGS1Q08116 209 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RALGDSQ12967 914 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 MTAPQ13126 283 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 IL23RQ5VWK5 629 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 ARL14EPQ8N8R7 260 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 ENKURQ8TC29 256 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 BRSK1Q8TDC3 778 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 Q96MT0 163 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 SLITRK2Q9H156 845 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 SGK2Q9HBY8 427 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 CORO1CQ9ULV4 474 aaPredicted RBP11.44□□□□□ -0.58
NOD1-201ENST00000222823 ERGIC3Q9Y282 383 aa11.44□□□□□ -0.58
NOD1-201ENST00000222823 ATG13O75143 517 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CCNA2P20248 432 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 HSPA7P48741 367 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SYPL2Q5VXT5 272 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TXNRD3NBQ6F5E7 133 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TMPRSS11BQ86T26 416 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CACTIN-AS1Q8N1I8 211 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CRYBG2Q8N1P7 616 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 CNTD1Q8N815 330 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 FAM47BQ8NA70 645 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ADCY4Q8NFM4 1077 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TWNKQ96RR1 684 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 ZNF607Q96SK3 696 aa11.43□□□□□ -0.58
NOD1-201ENST00000222823 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms