RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 STXBP1P61764 594 aaKnown RBP18.82■□□□□ 0.6
SMPD3-201ENST00000219334 C2orf27AQ580R0 203 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 ATXN7L2Q5T6C5 722 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-201ENST00000219334 BRSK1Q8TDC3 778 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 RCN3Q96D15 328 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 DYTNA2CJ06 578 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 XKRYO14609 159 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 NRP1O14786 923 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 NUDT17P0C025 328 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 CCL5P13501 91 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 PRR23BQ6ZRT6 265 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 OAFQ86UD1 273 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 OSER1Q9NX31 292 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 TCAF1Q9Y4C2 921 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 MAGEB3O15480 346 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 INAVAQ3KP66 663 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF540Q8NDQ6 660 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 IPCEF1Q8WWN9 437 aaPredicted RBP18.82■□□□□ 0.6
SMPD3-201ENST00000219334 EXOSC8Q96B26 276 aaKnown RBP18.82■□□□□ 0.6
SMPD3-201ENST00000219334 IPPKQ9H8X2 491 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 DAPK2Q9UIK4 370 aa18.82■□□□□ 0.6
SMPD3-201ENST00000219334 IGLV3-22A0A075B6J6 115 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 SNPHO15079 494 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 GDI1P31150 447 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 MAPK12P53778 367 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 IKBIPQ70UQ0 350 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 CXXC5Q7LFL8 322 aaKnown RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 NET1Q7Z628 596 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 AHI1Q8N157 1196 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 COPS7AQ9UBW8 275 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 PTGES3Q15185 160 aaKnown RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 VPS26BQ4G0F5 336 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 OR2T12Q8NG77 320 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 LYPLA1O75608 230 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 MYL9P24844 172 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 HOXC12P31275 282 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 RFX4Q33E94 735 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 DNAJB7Q7Z6W7 309 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 HIPK1Q86Z02 1210 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 HMGB4Q8WW32 186 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 ANXA4P09525 319 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 AVPR1BP47901 424 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 DHPSP49366 369 aaPredicted RBP18.81■□□□□ 0.6
SMPD3-201ENST00000219334 PNLIPRP1P54315 467 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 MAPK11Q15759 364 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 LDLRAP1Q5SW96 308 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 ADCY4Q8NFM4 1077 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 MAGEL2Q9UJ55 1249 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 PPLO60437 1756 aa18.81■□□□□ 0.6
SMPD3-201ENST00000219334 BBIP1A8MTZ0 92 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 LMO2P25791 158 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 ARMC3Q5W041 872 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 PSMG2Q969U7 264 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 EMID1Q96A84 441 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 TRMT61BQ9BVS5 477 aaKnown RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 TAPBPLQ9BX59 468 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 FGFBP2Q9BYJ0 223 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 CXorf56Q9H5V9 222 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 PACSIN3Q9UKS6 424 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SAMD4AQ9UPU9 718 aaKnown RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 AOC2O75106 756 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 MAPK10P53779 464 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 RAPSNQ13702 412 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 UBAP2LQ14157 1087 aaKnown RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 GAL3ST4Q96RP7 486 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 FZD8Q9H461 694 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 CORO1CQ9ULV4 474 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 Q9Y3F1 56 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 DHRS12A0PJE2 317 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 WNT7AO00755 349 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 TMEM164Q5U3C3 297 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 MREGQ8N565 214 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 VANGL1Q8TAA9 524 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 ZNF184Q99676 751 aaPredicted RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 PAIP1Q9H074 479 aaKnown RBP18.8■□□□□ 0.6
SMPD3-201ENST00000219334 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 OGDHLQ9ULD0 1010 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SCAMP1O15126 338 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 JAZF1Q86VZ6 243 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SPATA22Q8NHS9 363 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 ZCCHC10Q8TBK6 192 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 FAXDC2Q96IV6 333 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 KLHL31Q9H511 634 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 CIDEBQ9UHD4 219 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 UNCXA6NJT0 531 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SNAP91O60641 907 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 NR2F6P10588 404 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 ADSSP30520 456 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 TAS2R50P59544 299 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 ERICH5Q6P6B1 374 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 CADM2Q8N3J6 435 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 KLK6Q92876 244 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 SLC47A1Q96FL8 570 aa18.8■□□□□ 0.6
SMPD3-201ENST00000219334 TCF12Q99081 682 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms