RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 LRRC14BA6NHZ5 514 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 CD1EP15812 388 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 ACRV1P26436 265 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 CLCQ05315 142 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 C1orf146Q5VVC0 180 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 CRTC1Q6UUV9 634 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 USP45Q70EL2 814 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 ZDHHC7Q9NXF8 308 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 A0A1W2PQ67 120 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 KRT36O76013 467 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 POU2F2P09086 479 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 EN2P19622 333 aaPredicted RBP29.41■■■□□ 2.3
PABPN1-201ENST00000216727 NTHL1P78549 312 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 RCN1Q15293 331 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 ACCSLQ4AC99 568 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 LY6G5CQ5SRR4 150 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 PTRHD1Q6GMV3 140 aaKnown RBP29.41■■■□□ 2.3
PABPN1-201ENST00000216727 DPY19L3Q6ZPD9 716 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 KIAA0907Q7Z7F0 614 aaPredicted RBP29.41■■■□□ 2.3
PABPN1-201ENST00000216727 ADIPOR2Q86V24 386 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 PLPP6Q8IY26 295 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 ADGRG2Q8IZP9 1017 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 KYQ8NBH2 561 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 C19orf60Q96EN9 201 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 MARK4Q96L34 752 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 NSUN5Q96P11 429 aaKnown RBP29.41■■■□□ 2.3
PABPN1-201ENST00000216727 SLCO3A1Q9UIG8 710 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 DNAJC15Q9Y5T4 150 aa29.41■■■□□ 2.3
PABPN1-201ENST00000216727 AGAP14A8MT82 685 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 IQCF5A8MTL0 148 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 AZIN1O14977 448 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 UBDO15205 165 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 SQLEQ14534 574 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 KANK2Q63ZY3 851 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 LARP4Q71RC2 724 aaKnown RBP eCLIP29.4■■■□□ 2.33e-20■■□□□ 14
PABPN1-201ENST00000216727 TSPAN33Q86UF1 283 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 GPSM1Q86YR5 675 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 MTIF3Q9H2K0 278 aaKnown RBP29.4■■■□□ 2.3
PABPN1-201ENST00000216727 SARS2Q9NP81 518 aaKnown RBP29.4■■■□□ 2.3
PABPN1-201ENST00000216727 STX18Q9P2W9 335 aaKnown RBP29.4■■■□□ 2.3
PABPN1-201ENST00000216727 STOML1Q9UBI4 398 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 ZNF197O14709 1029 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 CA5AP35218 305 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 GCKP35557 465 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 TBL3Q12788 808 aaKnown RBP29.4■■■□□ 2.3
PABPN1-201ENST00000216727 C16orf89Q6UX73 402 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 SPRED2Q7Z698 418 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 GRASPQ7Z6J2 395 aaPredicted RBP29.4■■■□□ 2.3
PABPN1-201ENST00000216727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP29.4■■■□□ 2.35e-6■■■□□ 17.5
PABPN1-201ENST00000216727 TRPC4APQ8TEL6 797 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 ZSWIM3Q96MP5 696 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 SLC2A11Q9BYW1 496 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 CIPCQ9C0C6 399 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 DPP7Q9UHL4 492 aa29.4■■■□□ 2.3
PABPN1-201ENST00000216727 PPP6CO00743 305 aa29.39■■■□□ 2.3
PABPN1-201ENST00000216727 NUDT2P50583 147 aa29.39■■■□□ 2.3
PABPN1-201ENST00000216727 CHRNA6Q15825 494 aa29.39■■■□□ 2.3
PABPN1-201ENST00000216727 BOCQ9BWV1 1114 aa29.39■■■□□ 2.3
PABPN1-201ENST00000216727 ZDHHC6Q9H6R6 413 aa29.39■■■□□ 2.3
PABPN1-201ENST00000216727 PRPF19Q9UMS4 504 aaKnown RBP29.39■■■□□ 2.3
PABPN1-201ENST00000216727 WASH3PC4AMC7 463 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 AIM2O14862 343 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 BNIP3LO60238 219 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 HK3P52790 923 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 MYLK4Q86YV6 388 aaPredicted RBP29.38■■■□□ 2.29
PABPN1-201ENST00000216727 ZNF483Q8TF39 744 aaPredicted RBP29.38■■■□□ 2.29
PABPN1-201ENST00000216727 ANKRD27Q96NW4 1050 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 HTATIP2Q9BUP3 242 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 NDE1Q9NXR1 346 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 CRLS1Q9UJA2 301 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 GPC4O75487 556 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 PPP1R3AQ16821 1122 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 LRRC66Q68CR7 880 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 NXPE1Q8N323 547 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 FBXW8Q8N3Y1 598 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 CCDC97Q96F63 343 aaPredicted RBP29.38■■■□□ 2.29
PABPN1-201ENST00000216727 MYO7AQ13402 2215 aa29.38■■■□□ 2.29
PABPN1-201ENST00000216727 SLC9A3R1O14745 358 aaPredicted RBP29.37■■■□□ 2.29
PABPN1-201ENST00000216727 CHRM1P11229 460 aaPredicted RBP29.37■■■□□ 2.29
PABPN1-201ENST00000216727 UGT1A6P19224 532 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 UGT1A1P22309 533 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 UGT1A4P22310 534 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 UGT1A3P35503 534 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 UGT1A5P35504 534 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 PTDSS1P48651 473 aaKnown RBP29.37■■■□□ 2.29
PABPN1-201ENST00000216727 ATP4BP51164 291 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 MTTPP55157 894 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 MACC1Q6ZN28 852 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 C7orf61Q8IZ16 206 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 AHI1Q8N157 1196 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 GPR26Q8NDV2 337 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 ZNF707Q96C28 371 aaPredicted RBP29.37■■■□□ 2.29
PABPN1-201ENST00000216727 ASIC4Q96FT7 647 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 EFCAB1Q9HAE3 211 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 NUDT4Q9NZJ9 180 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 PCTPQ9UKL6 214 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 HCFC2Q9Y5Z7 792 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 WNT6Q9Y6F9 365 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 PDE4DIPQ5VU43 2346 aa29.37■■■□□ 2.29
PABPN1-201ENST00000216727 SNX2O60749 519 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms