RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 UGT2B17O75795 530 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CHRNB2P17787 502 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SSR2P43308 183 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 RNF144AP50876 292 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF613Q6PF04 617 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 LRRC49Q8IUZ0 686 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CD101Q93033 1021 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 BCKDKO14874 412 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PRKCHP24723 683 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 AKT2P31751 481 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 MBTD1Q05BQ5 628 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PRSS55Q6UWB4 352 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 DEFB118Q96PH6 123 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 GPR20Q99678 358 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SEMA3GQ9NS98 782 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PHF11Q9UIL8 331 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 RBM7Q9Y580 266 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 STXBP1P61764 594 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SFRP1Q8N474 314 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SMIM30A4D0T7 59 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC35F4A4IF30 521 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 IPO13O94829 963 aaKnown RBP13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SERPINA1P01009 418 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TFPIP10646 304 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TKTP29401 623 aaKnown RBP13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 LIPEQ05469 1076 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TTC23Q5W5X9 447 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 FSTL4Q6MZW2 842 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 MCFD2Q8NI22 146 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SCAMP5Q8TAC9 235 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 PSMG2Q969U7 264 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 CHIAQ9BZP6 476 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 PDZD7Q9H5P4 517 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 IPPKQ9H8X2 491 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 KIDINS220Q9ULH0 1771 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TLL1O43897 1013 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SNAP91O60641 907 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 DBIP07108 87 aaKnown RBP13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 CREB5Q02930 508 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TMEM198Q66K66 360 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 C1orf127Q8N9H9 656 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 DNASE1L2Q92874 299 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 TNFRSF25Q93038 417 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 FAIM2Q9BWQ8 316 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 CDADC1Q9BWV3 514 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 IKZF2Q9UKS7 526 aa13.52□□□□□ -0.24
TGFBR3-201ENST00000212355 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 ZBTB2Q8N680 514 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 CPSF7Q8N684 471 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 PCED1BQ96HM7 432 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 ARHGEF28Q8N1W1 1705 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 AGPSO00116 658 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 RPP40O75818 363 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 CLPXO76031 633 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 NT5EP21589 574 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 AKR1D1P51857 326 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 CRYBB1P53674 252 aaPredicted RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 GTF2H2Q13888 395 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 SNAPC1Q16533 368 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 PIK3R6Q5UE93 754 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 LRRC38Q5VT99 294 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 GTF2H2CQ6P1K8 395 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 TRIT1Q9H3H1 467 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 COMMD9Q9P000 198 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 ACTL7BQ9Y614 415 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 GRIN2DO15399 1336 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 LSM1O15116 133 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 TBX18O95935 607 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 RGS1Q08116 209 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 AMER2Q8N7J2 671 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF398Q8TD17 642 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 COPS8Q99627 209 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 PLGRKTQ9HBL7 147 aa13.52□□□□□ -0.25
TGFBR3-201ENST00000212355 NEMP2A6NFY4 417 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 TMEM233B4DJY2 109 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 SEPT4O43236 478 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 RXRGP48443 463 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 EIF2B5Q13144 721 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms