RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 EFNA1P20827 205 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ATP6AP1Q15904 470 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 SYT16Q17RD7 645 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 GCNT7Q6ZNI0 430 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ANKRD46Q86W74 232 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 LRRC52Q8N7C0 313 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 NDNFQ8TB73 568 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 BHMTQ93088 406 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 PSMG2Q969U7 264 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 C6orf62Q9GZU0 229 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 TBC1D4O60343 1298 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 HAPLN1P10915 354 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF37AP17032 561 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 CDKN1CP49918 316 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 TAF2Q6P1X5 1199 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 IL27RAQ6UWB1 636 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 OR7A2PQ8NGA2 310 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 RPL3LQ92901 407 aaKnown RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 KLQ9UEF7 1012 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 TTC36A6NLP5 189 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 F8W810 466 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 HPCAL1P37235 193 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 NR4A2P43354 598 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 ARSFP54793 590 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 NCS1P62166 190 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 VAC14Q08AM6 782 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 MARCH8Q5T0T0 291 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 TLK2Q86UE8 772 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 SLC22A9Q8IVM8 553 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 NPLOC4Q8TAT6 608 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 CCDC126Q96EE4 140 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 TSPAN17Q96FV3 270 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 CORO1BQ9BR76 489 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 EIF2B4Q9UI10 523 aaKnown RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 RGPD3A6NKT7 1758 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 RGPD4Q7Z3J3 1758 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 M0QZ92 97 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 SLC22A2O15244 555 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 SLC22A3O75751 556 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 GOT2P00505 430 aaKnown RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 S100BP04271 92 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 CYBBP04839 570 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF12P17014 697 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 CCL14Q16627 93 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 FAM45BPQ6NSW5 357 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF555Q8NEP9 628 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 FAM45AQ8TCE6 357 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 DACH2Q96NX9 599 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 HOPXQ9BPY8 73 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-201ENST00000075430 ROGDIQ9GZN7 287 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 MTRRQ9UBK8 725 aa16.62■□□□□ 0.25
CTDP1-201ENST00000075430 A0A1W2PQ67 120 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ABCB1P08183 1280 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SLC2A3P11169 496 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 HTR1BP28222 390 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SCNN1GP51170 649 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CYP4F2P78329 520 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CYP4F3Q08477 520 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 KYAT1Q16773 422 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 FAM117BQ6P1L5 589 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SLC22A16Q86VW1 577 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 MICU2Q8IYU8 434 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CADM3Q8N126 398 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 IRGQQ8WZA9 623 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ENTPD7Q9NQZ7 604 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ARMC1Q9NVT9 282 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 FAM8A1Q9UBU6 413 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ZNHIT2Q9UHR6 403 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 IPPQ9Y573 584 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 GPC6Q9Y625 555 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 G3V2T6 193 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CNOT3O75175 753 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ZNF682O95780 498 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 GLP2RO95838 553 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 DARSP14868 501 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 POLR2JP52435 117 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 KCNAB2Q13303 367 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 MFSD10Q14728 455 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SNX17Q15036 470 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ACAP2Q15057 778 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 GTDC1Q4AE62 458 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 MARC1Q5VT66 337 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 THAP5Q7Z6K1 395 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 SYTL1Q8IYJ3 562 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 CFAP52Q8N1V2 620 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 OR52B6Q8NGF0 335 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 TMEM125Q96AQ2 219 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 TBCCD1Q9NVR7 557 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 ERGIC3Q9Y282 383 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
CTDP1-201ENST00000075430 AQP12BA6NM10 295 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 A8MX80 341 aa16.61■□□□□ 0.25
CTDP1-201ENST00000075430 UPK3BL1B0FP48 263 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms