RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Q32M26 199 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zfp868Q3UTQ6 422 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rapgefl1Q68EF8 662 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cpsf6Q6NVF9 551 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 GcshQ91WK5 170 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mrpl45Q9D0Q7 306 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Map2k5Q9WVS7 448 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r118E9Q1C1 853 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Htr3aP23979 487 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ankrd13bQ5F259 626 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pfkfb4Q6DTY7 469 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Trnau1apQ80VC6 287 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Aoc2Q812C9 757 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf668Q8K2R5 619 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Efhc2Q9D485 750 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Glipr1l1Q9DAG6 236 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Il22bQ9JJY8 179 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 A0A1Y7VIU7 259 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r46L7N282 809 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 SpibO35906 267 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Larp7Q05CL8 570 aaKnown RBP15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 H2-M3Q31093 336 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Psg28Q4KL66 472 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Grb10Q60760 621 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 SvopQ8BFT9 548 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pggt1bQ8BUY9 377 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Il22Q9JJY9 179 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pias4Q9JM05 507 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 ZxdbA2CE44 873 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 9230113P08RikD3YWX3 137 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr596F8VQ26 312 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sgo2bJ3QMK1 1167 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pold1P52431 1105 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Naa20P61600 178 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zfp280bQ505F4 534 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr665Q8VG79 316 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 DhddsQ99KU1 333 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ergic3Q9CQE7 383 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Jam2Q9JI59 298 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf536Q8K083 1302 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sh3pxd2bA2AAY5 908 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Serpine3E9Q6A2 401 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Hps1O08983 704 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Clec2lP0C7M9 211 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 BC030870Q3V2G4 71 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Arl5aQ80ZU0 179 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Serpinb9dQ8BMT0 377 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Aqp12Q8CHJ2 290 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Plac9Q8K262 108 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 TmlheQ91ZE0 421 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr704Q9EPF6 315 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nufip1Q9QXX8 484 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 CpqQ9WVJ3 470 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm6811E9Q3Y8 510 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 NoctO35710 429 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 GnazO70443 355 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cma1P21844 247 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mrm3Q5ND52 418 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Usp17laQ61068 526 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Bend6Q6PFX2 281 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nrde2Q80XC6 1172 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ckap4Q8BMK4 575 aaKnown RBP15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Lpcat2Q8BYI6 544 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 TpbglQ8C013 384 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fcf1Q9CTH6 198 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Akr1a1Q9JII6 325 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Chrna6Q9R0W9 494 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm5538W4VSP6 401 aa15.44■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pdia2D3Z6P0 527 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc16a8O35308 492 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zbtb48Q1H9T6 681 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gpr19Q61121 415 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Insig1Q8BGI3 259 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 FicdQ8BIX9 458 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ddx1Q91VR5 740 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nsmce2Q91VT1 247 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pcdhga9Q91XX9 932 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pcdhb18Q91Y02 792 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam136aQ9CR98 138 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 VasnQ9CZT5 673 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 EbplQ9D0P0 206 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Plch1Q4KWH5 1682 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ms4a4aA0A087WRT7 236 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r14E9Q759 848 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tsc22d2E9Q7M2 769 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf683I7HJS4 458 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r31L7N1Z4 861 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 H2-AaP01910 256 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Atxn1lP0C7T6 687 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Plpp4Q0VBU9 271 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Lpcat1Q3TFD2 534 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tnks2Q3UES3 1166 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Marveld2Q3UZP0 555 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sel1l2Q3V172 688 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 HecaQ3V1N5 544 aaKnown RBP15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sfmbt2Q5DTW2 938 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tmem199Q5SYH2 208 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Znf280cQ6P3Y5 742 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Efr3bQ6ZQ18 817 aa15.43■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pxylp1Q8BHA9 480 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms