RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Fam71e2L7N480 754 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 MaffO54791 156 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 DxoO70348 397 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 PdgfbP31240 241 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Col6a2Q02788 1034 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Capn11Q6J756 714 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ubxn7Q6P5G6 467 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Elmo2Q8BHL5 732 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 4932411N23RikQ8C0S0 470 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tmem154Q8C4Q9 181 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 ApofQ91V80 315 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 L2hgdhQ91YP0 464 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Zfp655Q9CZP3 541 aaKnown RBP22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ndst3Q9EQH7 873 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nufip1Q9QXX8 484 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Bscl2Q9Z2E9 383 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Tcp11x2A2AEI7 503 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Zfp846G3X996 541 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 C4bpaP08607 469 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pdx1P52946 284 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Lim2P56563 173 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Cntn5P68500 1098 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Bnip1Q6QD59 228 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ints7Q7TQK1 966 aaKnown RBP22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Disc1Q811T9 852 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 4921511C20RikQ8BVT7 469 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Trmt10aQ8C1Z8 328 aaKnown RBP22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Hdac7Q8C2B3 938 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Arhgap29Q8CGF1 1266 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 TwnkQ8CIW5 685 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ggt7Q99JP7 662 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Aldh7a1Q9DBF1 539 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pkp3Q9QY23 797 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Capn7Q9R1S8 813 aa22.72■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ttll9A2APC3 461 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ift81O35594 676 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Npy2rP97295 381 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Mettl17Q3U2U7 461 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nt5eQ61503 576 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Grid2Q61625 1007 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Alkbh8Q80Y20 664 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Rbbp5Q8BX09 538 aaKnown RBP22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Vps39Q8R5L3 886 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pik3cgQ9JHG7 1102 aa22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Eif4hQ9WUK2 248 aaKnown RBP22.71■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm31371A0A1D5RM70 265 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ttc30a2A2AKQ8 664 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 PiggD3Z3Y1 983 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Slc4a5E9Q3M5 1116 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Gm3187M0QWW3 260 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Klc2O88448 599 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 CtsdP18242 410 aaKnown RBP22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Csrp3P50462 194 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Usp30Q3UN04 517 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ppm1hQ3UYC0 513 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Pde1aQ61481 565 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Map3k7Q62073 579 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Wfikkn2Q7TQN3 571 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Itln1bQ80ZA0 313 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nat14Q8BVG8 206 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Clptm1lQ8BXA5 539 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Olfr1208Q8VG47 308 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ttc30a1Q99J38 664 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ttc30bQ9CY00 664 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Ndufa13Q9ERS2 144 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Nupr1Q9WTK0 80 aa22.7■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Fam151bD3YUE4 279 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Taf4E9QAP7 1042 aaKnown RBP22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pabpc4lG5E8X2 370 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Igfbp2P47877 305 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Hnrnpa1P49312 320 aaKnown RBP22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fam46cQ5SSF7 391 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tmcc1Q69ZZ6 649 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Klhl5Q6PFE1 708 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tigd3Q7TM95 470 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Adamts2Q8C9W3 1213 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rmnd1Q8CI78 450 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Vmn1r214Q8R279 367 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr448Q8VES9 310 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Elp2Q91WG4 831 aaKnown RBP22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ppil1Q9D0W5 166 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Coro1cQ9WUM4 474 aa22.7■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gm7173A0A0G2JEB6 3132 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cacna1dQ99246 2179 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gbp11A9YVJ5 442 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Armc4B2RY50 1037 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Chil3O35744 398 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 P01740 135 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gdi1P50396 447 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 SnnP61807 88 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gm8773Q3UQ24 132 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 PigaQ64323 485 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Rpp25Q91WE3 199 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Dhrs7bQ99J47 323 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Lrrc40Q9CRC8 602 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Phf10Q9D8M7 497 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Lman2Q9DBH5 358 aaKnown RBP22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 AcadsbQ9DBL1 432 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Bex2Q9WTZ8 129 aa22.69■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tle6Q9WVB3 581 aa22.69■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms