RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 AtrxQ61687 2476 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Med13Q5SWW4 2171 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Pnldc1B2RXZ1 531 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Adamts6D3Z1A5 1117 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Smad6O35182 495 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 GzmkO35205 263 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Il2rgP34902 369 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ccr7P47774 378 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Lzts1P60853 599 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Rpl26P61255 145 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Sycp3P70281 254 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Adcy8P97490 1249 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Pde1bQ01065 535 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cdk18Q04899 451 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Mdga1Q0PMG2 940 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Nsun2Q1HFZ0 757 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Rnf40Q3U319 1001 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tax1bp1Q3UKC1 814 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Elf3Q3UPW2 391 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tspyl3Q3UYP3 334 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 FntaQ61239 377 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Fastkd5Q7TMV3 762 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Rbbp5Q8BX09 538 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Gpr152Q8BXS7 511 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Esrp2Q8K0G8 717 aaKnown RBP16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Retreg1dQ8VE91 480 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Lpgat1Q91YX5 370 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Bbs2Q9CWF6 721 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 L3hypdhQ9CXA2 354 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cldn19Q9ET38 224 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Stk11Q9WTK7 436 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 UxtQ9WTZ0 157 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cpne6Q9Z140 557 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Spta1P08032 2415 aa16.78■□□□□ 0.28
Trim54-201ENSMUST00000013771 Sppl2cA2A6C4 690 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Bpifb9bA2AJD1 591 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Fam46aD3Z5S8 447 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Vmn2r10K7N621 847 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Xbp1O35426 267 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Stc1O55183 247 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Hsd17b7O88736 334 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Fcgr3P08508 261 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 CebpbP28033 296 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Rab20P35295 233 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Actr1aP61164 376 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Wdr41Q3UDP0 460 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Gpr165Q3V3A3 455 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Itga1Q3V3R4 1179 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 ZpbpQ62522 350 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Zdhhc24Q6IR37 284 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Wnk4Q80UE6 1222 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Bpifb9aQ80XI7 591 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Creg2Q8BGC9 288 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Nlrp4aQ8BU40 982 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Slc39a13Q8BZH0 361 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Snrnp27Q8K194 155 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Rdh16f2Q8K3M1 318 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Actr1bQ8R5C5 376 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 DcxrQ91X52 244 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Rnf112Q96DY5 654 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Kdelr1Q99JH8 212 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Nsmce1Q9D720 266 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Anxa9Q9JHQ0 345 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Lztfl1Q9JHQ5 299 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Ca5bQ9QZA0 317 aa16.77■□□□□ 0.27
Trim54-201ENSMUST00000013771 Klhl18A0A0G2JGN5 579 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Cylc1A0A1B0GR13 642 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 6330409D20RikA2AK85 162 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 E9QMW4 1145 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Vmn2r75G5E8Z7 853 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Vmn2r9K7N6Z8 848 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Neurod4O09105 330 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Folh1O35409 752 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 AvilO88398 819 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Best1O88870 551 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Hoxa4P06798 285 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Atf2P16951 487 aaKnown RBP16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Gdpd4Q3TT99 632 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Arglu1Q3UL36 271 aaKnown RBP16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Foxred2Q3USW5 665 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Fam160a1Q505K2 1081 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Mtus1Q5HZI1 1210 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Sdf4Q61112 361 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Fam149b1Q6NSV7 578 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 LnpkQ7TQ95 425 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Trim6Q8BGE7 488 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Q8C3I9 435 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Galnt13Q8CF93 556 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 N4bp2l2Q8JZS6 575 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 LipmQ8K2A6 422 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Reep3Q99KK1 254 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Sntb1Q99L88 537 aaKnown RBP16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Nxnl2Q9D531 156 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Rexo2Q9D8S4 237 aa16.76■□□□□ 0.27
Trim54-201ENSMUST00000013771 Vwa5b1A9Z1V5 1215 aa16.75■□□□□ 0.27
Trim54-201ENSMUST00000013771 Zfp174B9EJW5 407 aa16.75■□□□□ 0.27
Trim54-201ENSMUST00000013771 E9Q0B3 247 aa16.75■□□□□ 0.27
Trim54-201ENSMUST00000013771 Galnt9G3X942 604 aa16.75■□□□□ 0.27
Trim54-201ENSMUST00000013771 Akr1b10G5E895 316 aa16.75■□□□□ 0.27
Trim54-201ENSMUST00000013771 Plin2P43883 425 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms