RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vps28Q9D1C8 221 aa12.68□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Slc4a11A2AJN7 862 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 ZxdbA2CE44 873 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Zscan5bB2RTN3 468 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Bub1O08901 1058 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 CcnhQ61458 323 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mef2dQ63943 514 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Angptl1Q640P2 490 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Paqr6Q6TCG5 343 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gpat3Q8C0N2 438 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Q8CCC3 530 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cfap61Q8CEL2 1252 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Wnt9aQ8R5M2 365 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mrgpra2Q91WW4 305 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Chil4Q91Z98 402 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 OptcQ920A0 328 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mcm8Q9CWV1 833 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Prorsd1Q9D820 169 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Trbv4A0A075B5I2 113 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gm28576A0A087WRP6 222 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Sirpb1aA0A0A6YYP6 397 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Dpysl2O08553 572 aaKnown RBP12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Nrp2O35375 931 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rab12P35283 243 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 AdslP54822 484 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rab8aP55258 207 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Serac1Q3U213 654 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 RhocQ62159 193 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rbl1Q64701 1063 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cpa4Q6P8K8 420 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Fam126aQ6P9N1 521 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rmnd5aQ80YQ8 391 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Arl5aQ80ZU0 179 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Zdhhc15Q8BGJ0 337 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 LzicQ8K3C3 190 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmem203Q8R235 136 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr695Q8VFM3 315 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ergic3Q9CQE7 383 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 XpotQ9CRT8 963 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Slc25a19Q9DAM5 318 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cntn6Q9JMB8 1028 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mad2l1Q9Z1B5 205 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mtm1Q9Z2C5 603 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Sult2b1O35400 338 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 ChgbP16014 677 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Sox6P40645 827 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 OstnP61364 130 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vps45P97390 570 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Eml1Q05BC3 814 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Zfp560Q3URI6 754 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Zc4h2Q68FG0 224 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 ScocQ78YZ6 125 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Olfr293Q7TS10 336 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Fam131aQ8BWU3 361 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Abi3Q8BYZ1 367 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Lgals12Q91VD1 314 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Smim14Q91VT8 99 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 TrabdQ99JY4 376 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gemin2Q9CQQ4 269 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Anks3Q9CZK6 655 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Hacd2Q9D3B1 254 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rsph14Q9D3W1 341 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Spag4Q9JJF2 443 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 RhoaQ9QUI0 193 aa12.67□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mrgpra2aA0A0R4J1Z0 331 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r84D3YWE3 849 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r38G3UYA8 861 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r33K7N705 861 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rab23P35288 237 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rnf19aP50636 840 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Btbd3P58545 530 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Ufm1P61961 85 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Fbxw11Q5SRY7 542 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 StyxQ60969 223 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Kirrel2Q7TSU7 700 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 IfneQ80ZF2 192 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Reep1Q8BGH4 201 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Rftn2Q8CHX7 500 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Pcdhgc3Q91XX1 934 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmem246Q91YV9 403 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Chid1Q922Q9 393 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 March2Q99M02 246 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Oxct1Q9D0K2 520 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Mfsd10Q9D2V8 456 aaKnown RBP12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tmem80Q9D3H0 123 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tnfrsf21Q9EPU5 655 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 AadatQ9WVM8 425 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gria3Q9Z2W9 888 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Faap100A2ACJ2 879 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Gm3336J3QMQ6 198 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Vmn2r67K7N6T2 851 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tpst2O88856 376 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 HmbsP22907 361 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 GlrbP48168 496 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Tlr12Q6QNU9 906 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Myl12aQ6ZWQ9 172 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Cpped1Q8BFS6 312 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Arhgef33Q8BW86 850 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 Wdr11Q8K1X1 1223 aa12.66□□□□□ -0.38
Clcn3-201ENSMUST00000004430 DenrQ9CQJ6 198 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms