RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 AGAP9Q5VTM2 703 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CLEC14AQ86T13 490 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 PIM3Q86V86 326 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 LONP2Q86WA8 852 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 C10orf107Q8IVU9 208 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 APLFQ8IW19 511 aaPredicted RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 WDR75Q8IWA0 830 aaKnown RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 SPATA6LQ8N4H0 392 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 KIF2BQ8N4N8 673 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 OR6Y1Q8NGX8 325 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 RDH11Q8TC12 318 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 EID2BQ96D98 161 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CHFRQ96EP1 664 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 SCRN2Q96FV2 425 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 LRIG1Q96JA1 1093 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 MSLNLQ96KJ4 702 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 AARSD1Q9BTE6 412 aaKnown RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 SARS2Q9NP81 518 aaKnown RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 DYRK4Q9NR20 520 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 DNAJC28Q9NX36 388 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 PKD2L2Q9NZM6 624 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 CPSF2Q9P2I0 782 aaKnown RBP8.8□□□□□ -1
PHGDH-219ENST00000641513 CD84Q9UIB8 345 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 LRRC42Q9Y546 428 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 DOCK9Q9BZ29 2069 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 BPTFQ12830 3046 aa8.8□□□□□ -1
PHGDH-219ENST00000641513 C5orf42Q9H799 3197 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 C16orf96A6NNT2 1141 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TMEM114B3SHH9 223 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 E5RI56 91 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 H7C0S8 307 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 GPR39O43194 453 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 OR1I1O60431 355 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 VPS26AO75436 327 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 KLHL2O95198 593 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 CBX6O95503 412 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SERPINE1P05121 402 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PYGLP06737 847 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 EPHX1P07099 455 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 CTSLP07711 333 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 C1SP09871 688 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 LTA4HP09960 611 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 TPBGLP0DKB5 382 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 RALBP11234 206 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PKMP14618 531 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 TIMP2P16035 220 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 UGT1A6P19224 532 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 CHRM3P20309 590 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 UGT1A1P22309 533 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 UGT1A4P22310 534 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 FDXRP22570 491 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 LHCGRP22888 699 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PSMA3P25788 255 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SERPINB3P29508 390 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PRDX6P30041 224 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 UGT1A3P35503 534 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 UGT1A5P35504 534 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 GRIA2P42262 883 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PTGER3P43115 390 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PSMD8P48556 350 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 XIAPP98170 497 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 OVGP1Q12889 678 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 HTR4Q13639 388 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PCLAFQ15004 111 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 CDKN3Q16667 212 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 AAK1Q2M2I8 961 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 HNRNPA1L2Q32P51 320 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 LRIT3Q3SXY7 679 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PRPF38BQ5VTL8 546 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 LYPLAL1Q5VWZ2 237 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PTRHD1Q6GMV3 140 aaKnown RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 ERAP2Q6P179 960 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 ZNF549Q6P9A3 640 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 FBXL19Q6PCT2 694 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 ZCCHC23Q6ZST2 131 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SNX20Q7Z614 316 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 DSG4Q86SJ6 1040 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SERPINA9Q86WD7 417 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TMPRSS6Q8IU80 811 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PIANPQ8IYJ0 282 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PHTF2Q8N3S3 785 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TEX9Q8N6V9 391 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SMRP1Q8NCR6 262 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PIP4K2CQ8TBX8 421 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 HEXDCQ8WVB3 486 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 LPGAT1Q92604 370 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 EXT2Q93063 718 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SGF29Q96ES7 293 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 MCCC1Q96RQ3 725 aaPredicted RBP8.79□□□□□ -1
PHGDH-219ENST00000641513 C1QTNF1Q9BXJ1 281 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 CLPBQ9H078 707 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PRO3102Q9H379 93 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 PCDH12Q9NPG4 1184 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.79□□□□□ -1
PHGDH-219ENST00000641513 CACNA2D2Q9NY47 1150 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 TAS2R13Q9NYV9 303 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 EPS15L1Q9UBC2 864 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 COPG2Q9UBF2 871 aa8.79□□□□□ -1
PHGDH-219ENST00000641513 STOML1Q9UBI4 398 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms