RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IRX1P78414 480 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 GSTM4Q03013 218 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 ZBTB16Q05516 673 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 SFSWAPQ12872 951 aaKnown RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 SEMA3AQ14563 771 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PTPRCAPQ14761 206 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 CDKL4Q5MAI5 379 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 LDLRAP1Q5SW96 308 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 METTL21CQ5VZV1 264 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PSAPL1Q6NUJ1 521 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 TTC23LQ6PF05 361 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 FAM151BQ6UXP7 276 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 SERPINA13PQ6UXR4 307 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 TRMT11Q7Z4G4 463 aaKnown RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PIANPQ8IYJ0 282 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 MICALL1Q8N3F8 863 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 TRAM1L1Q8N609 369 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 CHST14Q8NCH0 376 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 L3HYPDHQ96EM0 354 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 DCUN1D1Q96GG9 259 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 BIRC8Q96P09 236 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 VPS35Q96QK1 796 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 MYADMQ96S97 322 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 GATA5Q9BWX5 397 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 HDAC8Q9BY41 377 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 ZCCHC2Q9C0B9 1178 aaKnown RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 TMEM245Q9H330 911 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 FAM83DQ9H4H8 585 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 BPIFA1Q9NP55 256 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PFDN4Q9NQP4 134 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 CLEC1BQ9P126 229 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 TRIM33Q9UPN9 1127 aa9.65□□□□□ -0.86
PHGDH-215ENST00000641371 PRRC2BQ5JSZ5 2229 aaKnown RBP9.65□□□□□ -0.86
PHGDH-215ENST00000641371 A0A0G2JND7 137 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TRPC5OSA6NMA1 111 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 C16orf96A6NNT2 1141 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 LINC01565O15544 149 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 DLX3O60479 287 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 KAT7O95251 611 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TOP3BO95985 862 aaKnown RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ADH1BP00325 375 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ELFN1P0C7U0 828 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 CHRM1P11229 460 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 GLULP15104 373 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TIMP2P16035 220 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 CHRM3P20309 590 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 IMPDH1P20839 514 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 GDI1P31150 447 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 MMP12P39900 470 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 OPRD1P41143 372 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PTSQ03393 145 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ZNF234Q14588 700 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 CHRNA6Q15825 494 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 GALNTL6Q49A17 601 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 EFL1Q7Z2Z2 1120 aaKnown RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TTC7BQ86TV6 843 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ISCA2Q86U28 154 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 LDB1Q86U70 411 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 C12orf40Q86WS4 652 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ZSWIM9Q86XI8 627 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 MYO1HQ8N1T3 1032 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 SMRP1Q8NCR6 262 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 DNASE1L2Q92874 299 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 EID2BQ96D98 161 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 MSLNLQ96KJ4 702 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 GPR21Q99679 349 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TMEM120AQ9BXJ8 343 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 POMKQ9H5K3 350 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PCDH12Q9NPG4 1184 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ZNF358Q9NW07 568 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 CLDND1Q9NY35 253 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 CPSF2Q9P2I0 782 aaKnown RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 ZFP69BQ9UJL9 534 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PPM1HQ9ULR3 514 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 RNF112Q9ULX5 631 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 DNAJC16Q9Y2G8 782 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TNPO3Q9Y5L0 923 aaKnown RBP9.64□□□□□ -0.87
PHGDH-215ENST00000641371 TRANK1O15050 2925 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PLXNA2O75051 1894 aa9.64□□□□□ -0.87
PHGDH-215ENST00000641371 PABPN1LA6NDY0 278 aaKnown RBP9.63□□□□□ -0.87
PHGDH-215ENST00000641371 A8MT66 165 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 PRRT4C9JH25 899 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 ANHXE9PGG2 379 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 RFXAPO00287 272 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 KPNA3O00505 521 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-215ENST00000641371 GAPDHSO14556 408 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-215ENST00000641371 WNT9AO14904 365 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 SLC22A2O15244 555 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 HDAC3O15379 428 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 AP1G1O43747 822 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 TBX10O75333 385 aa9.63□□□□□ -0.87
PHGDH-215ENST00000641371 DNAJC8O75937 253 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms