RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ZDHHC20Q5W0Z9 365 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 OGFOD3Q6PK18 319 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 TAF8Q7Z7C8 310 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 NAP1L3Q99457 506 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-231ENST00000640499 OR2AG1Q9H205 316 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 SPATS2LQ9NUQ6 558 aaKnown RBP26.43■■□□□ 1.82
VEGFA-231ENST00000640499 PCDHGA1Q9Y5H4 931 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 MROH6A6NGR9 719 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 NUAK1O60285 661 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 CRTAMO95727 393 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 APRTP07741 180 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 PSMA3P25788 255 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 PEX6Q13608 980 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 CCDC157Q569K6 752 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 DHRS13Q6UX07 377 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 LINC00523Q86TU6 105 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 OR2M4Q96R27 311 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 GPR34Q9UPC5 381 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 GPSM3Q9Y4H4 160 aa26.42■■□□□ 1.82
VEGFA-231ENST00000640499 TCRBV7S3A2A0A539 114 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 CASC3O15234 703 aaKnown RBP26.41■■□□□ 1.82
VEGFA-231ENST00000640499 NOBOXO60393 691 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 PHF2O75151 1096 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 RFPL3O75679 317 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 CLDN6P56747 220 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 TMPRSS15P98073 1019 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 DAB2P98082 770 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 GUSBP11Q6P575 273 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 CCDC137Q6PK04 289 aaKnown RBP26.41■■□□□ 1.82
VEGFA-231ENST00000640499 C4orf22Q6V702 233 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 KYQ8NBH2 561 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 LRRC45Q96CN5 670 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 DNAJC1Q96KC8 554 aaKnown RBP26.41■■□□□ 1.82
VEGFA-231ENST00000640499 C19orf43Q9BQ61 176 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 EIF2B3Q9NR50 452 aaKnown RBP26.41■■□□□ 1.82
VEGFA-231ENST00000640499 SIRPGQ9P1W8 387 aa26.41■■□□□ 1.82
VEGFA-231ENST00000640499 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.4■■□□□ 1.82
VEGFA-231ENST00000640499 EME2A4GXA9 379 aaPredicted RBP26.4■■□□□ 1.82
VEGFA-231ENST00000640499 E7EVH7 732 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 CHUKO15111 745 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 KRT14P02533 472 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 SHC2P98077 582 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 CDH17Q12864 832 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 CCDC38Q502W7 563 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 HS1BP3Q53T59 392 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 ZNF534Q76KX8 674 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 FAM46DQ8NEK8 389 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 GPR156Q8NFN8 814 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 ZNF398Q8TD17 642 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 CAPZA3Q96KX2 299 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 RMI1Q9H9A7 625 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 TAAR2Q9P1P5 351 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 ZNHIT2Q9UHR6 403 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 DOLKQ9UPQ8 538 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 SAR1BQ9Y6B6 198 aa26.4■■□□□ 1.82
VEGFA-231ENST00000640499 ZFC3H1O60293 1989 aaKnown RBP26.4■■□□□ 1.82
VEGFA-231ENST00000640499 CTAGE9A4FU28 777 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 AGAP14A8MT82 685 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 SRP72O76094 671 aaKnown RBP26.39■■□□□ 1.82
VEGFA-231ENST00000640499 TRIM16O95361 564 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 PRAMEF1O95521 474 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 LMAN1P49257 510 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 VPS41P49754 854 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 BASP1P80723 227 aaKnown RBP26.39■■□□□ 1.82
VEGFA-231ENST00000640499 NR0B2Q15466 257 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 PERM1Q5SV97 790 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 MARCH9Q86YJ5 346 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 GALNT13Q8IUC8 556 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 PHYKPLQ8IUZ5 450 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 ZNF547Q8IVP9 402 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 ARL10Q8N8L6 244 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 CCDC97Q96F63 343 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-231ENST00000640499 SCNM1Q9BWG6 230 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 GSDMCQ9BYG8 508 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 NLE1Q9NVX2 485 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-231ENST00000640499 SMOXQ9NWM0 555 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 GULP1Q9UBP9 304 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 KLK13Q9UKR3 277 aa26.39■■□□□ 1.82
VEGFA-231ENST00000640499 RP1P56715 2156 aa26.39■■□□□ 1.81
VEGFA-231ENST00000640499 FAM221BA6H8Z2 402 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 MAGEA6P43360 314 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 PDE1BQ01064 536 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 TMEM115Q12893 351 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 ILF3Q12906 894 aaKnown RBP eCLIP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 ILKQ13418 452 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 SMAD1Q15797 465 aaKnown RBP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 GPRC6AQ5T6X5 926 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 SLC30A9Q6PML9 568 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 PPP1R21Q6ZMI0 780 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 C17orf82Q86X59 251 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 DNAAF3Q8N9W5 541 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 IFI44Q8TCB0 444 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 SCG3Q8WXD2 468 aaKnown RBP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.38■■□□□ 1.81
VEGFA-231ENST00000640499 SLC23A2Q9UGH3 650 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 PADI4Q9UM07 663 aa26.38■■□□□ 1.81
VEGFA-231ENST00000640499 AKAP13Q12802 2813 aa26.37■■□□□ 1.81
VEGFA-231ENST00000640499 CCDC78A2IDD5 438 aa26.37■■□□□ 1.81
VEGFA-231ENST00000640499 CPED1A4D0V7 1026 aa26.37■■□□□ 1.81
VEGFA-231ENST00000640499 GRID2O43424 1007 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms