RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ARMC8Q8IUR7 673 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 STPG4Q8N801 248 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 TM9SF4Q92544 642 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 MMABQ96EY8 250 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-216ENST00000640058 TMEM68Q96MH6 324 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 NEUROD6Q96NK8 337 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 LITAFQ99732 161 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 RBM4Q9BWF3 364 aaKnown RBP4.54□□□□□ -1.68
CCDC7-216ENST00000640058 BARHL1Q9BZE3 327 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 CNOT8Q9UFF9 292 aaKnown RBP4.54□□□□□ -1.68
CCDC7-216ENST00000640058 MAU2Q9Y6X3 613 aa4.54□□□□□ -1.68
CCDC7-216ENST00000640058 KDM3AQ9Y4C1 1321 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 OR5K3A6NET4 321 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 ANTXRLA6NF34 631 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 A6NLC8 198 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 CIDEAO60543 219 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 CTSVO60911 334 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 PATE4P0C8F1 98 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 AHRP35869 848 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 ARCN1P48444 511 aaKnown RBP4.53□□□□□ -1.68
CCDC7-216ENST00000640058 CEBPZQ03701 1054 aaKnown RBP4.53□□□□□ -1.68
CCDC7-216ENST00000640058 TMEM115Q12893 351 aaPredicted RBP4.53□□□□□ -1.68
CCDC7-216ENST00000640058 GAGE5Q13069 117 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 GAGE6Q13070 117 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 CCDC6Q16204 474 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 MYLK3Q32MK0 819 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 TMEM30BQ3MIR4 351 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 KRTCAP3Q53RY4 240 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 WDR38Q5JTN6 314 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SFMBT2Q5VUG0 894 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 ACAD10Q6JQN1 1059 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SLC27A1Q6PCB7 646 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 ATF7IPQ6VMQ6 1270 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 RBM15BQ8NDT2 890 aaKnown RBP4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SMARCE1Q969G3 411 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 PHF21AQ96BD5 680 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SCRN2Q96FV2 425 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 GFRA4Q9GZZ7 299 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SCPEP1Q9HB40 452 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 LTB4R2Q9NPC1 389 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 TCP11L1Q9NUJ3 509 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 TAS2R10Q9NYW0 307 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 KLHL9Q9P2J3 617 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 COPG2Q9UBF2 871 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 STK39Q9UEW8 545 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SLC13A4Q9UKG4 626 aa4.53□□□□□ -1.68
CCDC7-216ENST00000640058 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 KCNN4O15554 427 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 TGFB1I1O43294 461 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 TBX6O95947 436 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 TUBBP07437 444 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 INHBAP08476 426 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF883P0CG24 379 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 UBL4AP11441 157 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 NR2F2P24468 414 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 TUBB4BP68371 445 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 CCNYL2Q5T2Q4 361 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 PAPD4Q6PIY7 484 aaKnown RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 SMAP1Q8IYB5 467 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF248Q8NDW4 579 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 METTL6Q8TCB7 284 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 UTP15Q8TED0 518 aaKnown RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 INTS12Q96CB8 462 aaKnown RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 OXNAD1Q96HP4 312 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 MOV10L1Q9BXT6 1211 aaKnown RBP4.52□□□□□ -1.69
CCDC7-216ENST00000640058 PIGMQ9H3S5 423 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 TRPC7Q9HCX4 862 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 SLC52A3Q9NQ40 469 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 DLGAP2Q9P1A6 1054 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 KCNK7Q9Y2U2 307 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 CLIC4Q9Y696 253 aa4.52□□□□□ -1.69
CCDC7-216ENST00000640058 NPIPB15A6NHN6 443 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 H3BQ06 376 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 PRKNO60260 465 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 PAGE4O60829 102 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 UGT1A1P22309 533 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 VEGFCP49767 419 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 HSD17B4P51659 736 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 OLR1P78380 273 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 PDE1CQ14123 709 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 DPCR1Q3MIW9 517 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 PLEKHM3Q6ZWE6 761 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 ATG9AQ7Z3C6 839 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 SDCCAG8Q86SQ7 713 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 OR1J2Q8NGS2 313 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 KCNG4Q8TDN1 519 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 DNAAF4Q8WXU2 420 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 EGLN1Q9GZT9 426 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 RANBP17Q9H2T7 1088 aaKnown RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 RANGRFQ9HD47 186 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF624Q9P2J8 865 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-216ENST00000640058 JRKLQ9Y4A0 524 aa4.51□□□□□ -1.69
CCDC7-216ENST00000640058 SNED1Q8TER0 1413 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 A0A1W2PP11 408 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 EIF4E1BA6NMX2 242 aaKnown RBP4.5□□□□□ -1.69
CCDC7-216ENST00000640058 ATP2A1O14983 1001 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms