RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 SLITRK1Q96PX8 696 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 FYTTD1Q96QD9 318 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 CSF3RQ99062 836 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 BTBD2Q9BX70 525 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 AGPAT3Q9NRZ7 376 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 PAK1IP1Q9NWT1 392 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 RDH8Q9NYR8 311 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 ZNF175Q9Y473 711 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 USP3Q9Y6I4 520 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 TRAV20A0A0B4J274 112 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 CCDC154A6NI56 674 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 TRDMT1O14717 391 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 NR3C2P08235 984 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 FGF3P11487 239 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 AZGP1P25311 298 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 MPSTP25325 297 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 EPHX2P34913 555 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 TALDO1P37837 337 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 EIF2DP41214 584 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 GPR68Q15743 365 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 GRTP1Q5TC63 336 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 EPGNQ6UW88 154 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 UBE2J2Q8N2K1 259 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 ZBTB44Q8NCP5 570 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 SLC7A14Q8TBB6 771 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 FEZF2Q8TBJ5 459 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 LENG9Q96B70 501 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 MTERF3Q96E29 417 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 RIPOR3Q96MK2 946 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 UROC1Q96N76 676 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 DHRS4Q9BTZ2 278 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 SLC6A15Q9H2J7 730 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 IFT46Q9NQC8 304 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 FAM49BQ9NUQ9 324 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 KIAA1549LQ6ZVL6 1849 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 FAM155AB1AL88 458 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 F5H423 210 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 STMND1H3BQB6 276 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 KCNN4O15554 427 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 LILRA1O75019 489 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 ENTPD3O75355 529 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 SOAT2O75908 522 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 SLITRK5O94991 958 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 MT-CO1P00395 513 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 ZNF806P0C7X5 589 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 ATP6V1B2P21281 511 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 TUBB3Q13509 450 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 RBM48Q5RL73 367 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 CATSPEREQ5SY80 951 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 INTS11Q5TA45 600 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 GDPD3Q7L5L3 318 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 CRYGNQ8WXF5 182 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 LGALS12Q96DT0 336 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 C12orf57Q99622 126 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 MMP27Q9H306 513 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 PIF1Q9H611 641 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 KAT8Q9H7Z6 458 aaKnown RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 TRIM45Q9H8W5 580 aaPredicted RBP7.08□□□□□ -1.28
NECAP1-213ENST00000638883 DNAJC11Q9NVH1 559 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 WBP1LQ9NX94 342 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 IL20Q9NYY1 176 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 SPATA2Q9UM82 520 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 EDARQ9UNE0 448 aa7.08□□□□□ -1.28
NECAP1-213ENST00000638883 C9IYK1 514 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 H3BRB1 525 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ACOT8O14734 319 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 GNB5O14775 395 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 CHRNA1P02708 482 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 HOXA13P31271 388 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-213ENST00000638883 POLR2IP36954 125 aaKnown RBP7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ZNF157P51786 506 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ERVFC1P60507 584 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ZNF45Q02386 682 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 POU5F1BQ06416 359 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 MEP1AQ16819 746 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ASPRV1Q53RT3 343 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 MAP1SQ66K74 1059 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-213ENST00000638883 PM20D1Q6GTS8 502 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 FAM71AQ8IYT1 594 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 EMC1Q8N766 993 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 NAT8LQ8N9F0 302 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ZNF511Q8NB15 262 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 XXYLT1Q8NBI6 393 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 FBXW5Q969U6 566 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 HS3ST6Q96QI5 342 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 SEC22CQ9BRL7 303 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 NECTIN3Q9NQS3 549 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 USE1Q9NZ43 259 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 CPNE7Q9UBL6 633 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.07□□□□□ -1.28
NECAP1-213ENST00000638883 CYB5R1Q9UHQ9 305 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 ANAPC2Q9UJX6 822 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 VPS28Q9UK41 221 aa7.07□□□□□ -1.28
NECAP1-213ENST00000638883 GRIP1Q9Y3R0 1128 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms