RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	BRF2	Q9HAW0	419 aa		3.58	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ZNF446	Q9NWS9	450 aa		3.58	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CHCHD3	Q9NX63	227 aa	Known RBP	3.58	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TRIM17	Q9Y577	477 aa		3.58	□□□□□ -1.84
HNRNPU-215	ENST00000638589	COL24A1	Q17RW2	1714 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ADCY9	O60503	1353 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	KIR2DS5	A0A0G2JLQ3	304 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DPPA5	A6NC42	116 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	AGAP14	A8MT82	685 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589		K7EPI3	171 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	KIR2DS3	K7RE56	304 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MOSPD3	O75425	235 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	BEST1	O76090	585 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CLDN7	O95471	211 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	HOXB9	P17482	250 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TFEB	P19484	476 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MSN	P26038	577 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	U2AF2	P26368	475 aa	Known RBP eCLIP	3.57	□□□□□ -1.84	2e-10	■■□□□ 12.9
HNRNPU-215	ENST00000638589	STIP1	P31948	543 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PIGA	P37287	484 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MTHFR	P42898	656 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	NR4A2	P43354	598 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	HNRNPH2	P55795	449 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	RPS13	P62277	151 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CCDC173	Q0VFZ6	552 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MAPK7	Q13164	816 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	INPP5J	Q15735	1006 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TBCE	Q15813	527 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SLC18A3	Q16572	532 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PRTG	Q2VWP7	1150 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	BMP2KL	Q5H9B9	411 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TTC19	Q6DKK2	380 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	KDELC1	Q6UW63	502 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	G2E3	Q7L622	706 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SZRD1	Q7Z422	152 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ENDOV	Q8N8Q3	282 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SPC24	Q8NBT2	197 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ZMIZ2	Q8NF64	920 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DENND1A	Q8TEH3	1009 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ARHGEF2	Q92974	986 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CABS1	Q96KC9	395 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PPP1R13B	Q96KQ4	1090 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	GSDMA	Q96QA5	445 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TREX2	Q9BQ50	279 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	GPR63	Q9BZJ6	419 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DNAI2	Q9GZS0	605 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	C2orf40	Q9H1Z8	148 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	WDR6	Q9NNW5	1121 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	HPS4	Q9NQG7	708 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	RXFP3	Q9NSD7	469 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DDX18	Q9NVP1	670 aa	Known RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	HPF1	Q9NWY4	346 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	TUBA8	Q9NY65	449 aa	Predicted RBP	3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PEMT	Q9UBM1	199 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DDX19B	Q9UMR2	479 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	NAALADL1	Q9UQQ1	740 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	UBR3	Q6ZT12	1888 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	AFF2	P51816	1311 aa		3.57	□□□□□ -1.84
HNRNPU-215	ENST00000638589	RGSL1	A5PLK6	1076 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	KRT87P	A6NCN2	255 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	LRRC72	A6NJI9	287 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	FAM25E	A8MYX2	175 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	STMND1	H3BQB6	276 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	RIPK2	O43353	540 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	LDB2	O43679	373 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SLC22A3	O75751	556 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ADA	P00813	363 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	AFP	P02771	609 aa	Known RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	UROD	P06132	367 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CD63	P08962	238 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ALOX12	P18054	663 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PRKCH	P24723	683 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MLH1	P40692	756 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	RABIF	P47224	123 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MXI1	P50539	228 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PRELP	P51888	382 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SLC12A3	P55017	1021 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	UBE3A	Q05086	875 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ACTN3	Q08043	901 aa	Predicted RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	GRIK3	Q13003	919 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SLC39A6	Q13433	755 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	THOC5	Q13769	683 aa	Known RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ANKRD1	Q15327	319 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	C5orf22	Q49AR2	442 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	GPR139	Q6DWJ6	353 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	KLHL10	Q6JEL2	608 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CAVIN1	Q6NZI2	390 aa	Known RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	MARK2	Q7KZI7	788 aa	Known RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CENPQ	Q7L2Z9	268 aa	Predicted RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	LPCAT2	Q7L5N7	544 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	PPP1R42	Q7Z4L9	355 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	R3HCC1L	Q7Z5L2	792 aa	Known RBP	3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	WDR5B	Q86VZ2	330 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	CADM3	Q8N126	398 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DCLK2	Q8N568	766 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	DNAAF1	Q8NEP3	725 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SPATA18	Q8TC71	538 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SPPL3	Q8TCT6	385 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	ADAMTS14	Q8WXS8	1223 aa		3.56	□□□□□ -1.84
HNRNPU-215	ENST00000638589	SHC3	Q92529	594 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms