RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 C6orf62Q9GZU0 229 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 THAP1Q9NVV9 213 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 A8MUI8 341 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 CHST10O43529 356 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 ST3GAL4Q11206 333 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 FAM189A2Q15884 450 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 DHFR2Q86XF0 187 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 MYDGFQ969H8 173 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 GAL3ST3Q96A11 431 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 PANX1Q96RD7 426 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 PAFAH2Q99487 392 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 RIOX1Q9H6W3 641 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 SFXN1Q9H9B4 322 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 IKZF2Q9UKS7 526 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 IKZF3Q9UKT9 509 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 PHF24Q9UPV7 400 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 PCDHGB1Q9Y5G3 927 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 ATXN2Q99700 1313 aaKnown RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 COL14A1Q05707 1796 aaKnown RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 RGSL1A5PLK6 1076 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 IRAK2O43187 625 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 LCA5LO95447 670 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 ADRA1DP25100 572 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 GSSP48637 474 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 RPS3AP61247 264 aaKnown RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 MRPS35P82673 323 aaKnown RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 TBX2Q13207 712 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 NFATC2Q13469 925 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 UBXN11Q5T124 520 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 GJB7Q6PEY0 223 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 PRSS58Q8IYP2 241 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 OR2L3Q8NG85 312 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 NINJ1Q92982 152 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 LINGO1Q96FE5 620 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 CATSPER2Q96P56 530 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 KLF6Q99612 283 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-217ENST00000637988 ALG9Q9H6U8 611 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 CCNB1IP1Q9NPC3 277 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 OSER1Q9NX31 292 aa6.1□□□□□ -1.43
SCN1A-217ENST00000637988 A0A1B0GVM2 712 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 TCAF2A6NFQ2 919 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KCNK1O00180 336 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 INPPL1O15357 1258 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KLRK1P26718 216 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CCR8P51685 355 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 MAPK12P53778 367 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CACNG1Q06432 222 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 TERF2Q15554 542 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 TREML2Q5T2D2 321 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 OTUD3Q5T2D3 398 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FRRS1Q6ZNA5 592 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 QSOX2Q6ZRP7 698 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CAMKVQ8NCB2 501 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CASKIN2Q8WXE0 1202 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 NCSTNQ92542 709 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ANKS1AQ92625 1134 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 RNF145Q96MT1 663 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 BRF2Q9HAW0 419 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FBRSL1Q9HCM7 1045 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 XPR1Q9UBH6 696 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FZD1Q9UP38 647 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 A0A0A0MRY4 1105 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GPR25O00155 361 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 DNM1LO00429 736 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 NUAK1O60285 661 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ABCB7O75027 752 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 OR7A10O76100 309 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PCSK2P16519 638 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CYP3A5P20815 502 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CALB2P22676 271 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CCND1P24385 295 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KCNJ1P48048 391 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CREB5Q02930 508 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FCHO2Q0JRZ9 810 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GRIK5Q16478 980 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 TMEM35AQ53FP2 167 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 CWF19L1Q69YN2 538 aaKnown RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 GDF6Q6KF10 455 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ZBTB49Q6ZSB9 765 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SCUBE1Q8IWY4 988 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 OFCC1Q8IZS5 231 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 FBXO30Q8TB52 745 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 ZCCHC10Q8TBK6 192 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 KLHDC7BQ96G42 594 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SPATA13Q96N96 652 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 USP29Q9HBJ7 922 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SIGLEC16A6NMB1 481 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SPATA31C2B4DYI2 1134 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SERPINE1P05121 402 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SHMT1P34896 483 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 HEPACAMQ14CZ8 416 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SLC22A15Q8IZD6 547 aa6.09□□□□□ -1.43
SCN1A-217ENST00000637988 SNX33Q8WV41 574 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms