RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ZNF680Q8NEM1 530 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TRPV3Q8NET8 790 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 BPIFCQ8NFQ6 507 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 OR8J1Q8NGP2 316 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 LKAAEAR1Q8TD35 194 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ELP5Q8TE02 316 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PAQR8Q8TEZ7 354 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CKAP2Q8WWK9 683 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RAPGEF4Q8WZA2 1011 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SEPT8Q92599 483 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TNFRSF14Q92956 283 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FBXW5Q969U6 566 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SPSB4Q96A44 273 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 KIAA1143Q96AT1 154 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 C3orf49Q96BT1 292 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RASD2Q96D21 266 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TMCO6Q96DC7 493 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FAM122AQ96E09 287 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MED30Q96HR3 178 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 RAX2Q96IS3 184 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MAGED4Q96JG8 741 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ELMO2Q96JJ3 720 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PGBD1Q96JS3 809 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 NSMCE2Q96MF7 247 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TSNARE1Q96NA8 513 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CIB1Q99828 191 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SSX3Q99909 188 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FDXACB1Q9BRP7 624 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 DSCC1Q9BVC3 393 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 GON7Q9BXV9 100 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ANO3Q9BYT9 981 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 TP63Q9H3D4 680 aaPredicted RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 PCIF1Q9H4Z3 704 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SLC32A1Q9H598 525 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 C12orf10Q9HB07 376 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 MRPL47Q9HD33 250 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 MRPL40Q9NQ50 206 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 GPR27Q9NS67 375 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ZDHHC18Q9NUE0 388 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 DNAJC11Q9NVH1 559 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ARL8BQ9NVJ2 186 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ASNSD1Q9NWL6 643 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 NCDNQ9UBB6 729 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 FBXW2Q9UKT8 454 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SARDHQ9UL12 918 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PADI1Q9ULC6 663 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 VANGL2Q9ULK5 521 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CBLCQ9ULV8 474 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 ERVK-11Q9UQG0 969 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 CHMP2BQ9UQN3 213 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 HBS1LQ9Y450 684 aaKnown RBP3.01□□□□□ -1.93
VIM-210ENST00000637053 PLEKHM1Q9Y4G2 1056 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PCDHB1Q9Y5F3 818 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 SNX14Q9Y5W7 946 aa3.01□□□□□ -1.93
VIM-210ENST00000637053 PARD3Q8TEW0 1356 aa3□□□□□ -1.93
VIM-210ENST00000637053 ACEP12821 1306 aa3□□□□□ -1.93
VIM-210ENST00000637053 NPHP3Q7Z494 1330 aa3□□□□□ -1.93
VIM-210ENST00000637053 KIAA1217Q5T5P2 1943 aa3□□□□□ -1.93
VIM-210ENST00000637053 A0A087X1B8 175 aa3□□□□□ -1.93
VIM-210ENST00000637053 CCDC187A0A096LP49 1063 aa3□□□□□ -1.93
VIM-210ENST00000637053 A0A0U1RQV5 110 aa3□□□□□ -1.93
VIM-210ENST00000637053 ELOVL7A1L3X0 281 aa3□□□□□ -1.93
VIM-210ENST00000637053 HTR3EA5X5Y0 456 aa3□□□□□ -1.93
VIM-210ENST00000637053 CFAP73A6NFT4 308 aa3□□□□□ -1.93
VIM-210ENST00000637053 OOEPA6NGQ2 149 aa3□□□□□ -1.93
VIM-210ENST00000637053 BTBD18B2RXH4 712 aa3□□□□□ -1.93
VIM-210ENST00000637053 GOLGA8KD6RF30 607 aa3□□□□□ -1.93
VIM-210ENST00000637053 H0Y858 1186 aa3□□□□□ -1.93
VIM-210ENST00000637053 UBE2Q2LH0YL09 131 aa3□□□□□ -1.93
VIM-210ENST00000637053 LGALS8O00214 317 aa3□□□□□ -1.93
VIM-210ENST00000637053 XPO1O14980 1071 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 GSTA4O15217 222 aa3□□□□□ -1.93
VIM-210ENST00000637053 FOXP2O15409 715 aa3□□□□□ -1.93
VIM-210ENST00000637053 B4GALT2O60909 372 aa3□□□□□ -1.93
VIM-210ENST00000637053 SORBS2O94875 1100 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 PGLSO95336 258 aa3□□□□□ -1.93
VIM-210ENST00000637053 ZBTB7AO95365 584 aa3□□□□□ -1.93
VIM-210ENST00000637053 IL1BP01584 269 aa3□□□□□ -1.93
VIM-210ENST00000637053 APOA1P02647 267 aa3□□□□□ -1.93
VIM-210ENST00000637053 TFRCP02786 760 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 EIF2S1P05198 315 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 PNMA6AP0CW24 399 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 OR8G3PP0DMU2 310 aa3□□□□□ -1.93
VIM-210ENST00000637053 ITGA4P13612 1032 aa3□□□□□ -1.93
VIM-210ENST00000637053 IL1R1P14778 569 aa3□□□□□ -1.93
VIM-210ENST00000637053 EZRP15311 586 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 CTRB1P17538 263 aa3□□□□□ -1.93
VIM-210ENST00000637053 PRKACAP17612 351 aa3□□□□□ -1.93
VIM-210ENST00000637053 CDH2P19022 906 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 TCN1P20061 433 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 MYF6P23409 242 aa3□□□□□ -1.93
VIM-210ENST00000637053 OTX2P32243 289 aa3□□□□□ -1.93
VIM-210ENST00000637053 CTNNB1P35222 781 aa3□□□□□ -1.93
VIM-210ENST00000637053 PBX3P40426 434 aa3□□□□□ -1.93
VIM-210ENST00000637053 ALDH3B1P43353 468 aa3□□□□□ -1.93
VIM-210ENST00000637053 SLC15A1P46059 708 aa3□□□□□ -1.93
VIM-210ENST00000637053 RGS19P49795 217 aa3□□□□□ -1.93
VIM-210ENST00000637053 ENTPD1P49961 510 aa3□□□□□ -1.93
VIM-210ENST00000637053 DGKEP52429 567 aa3□□□□□ -1.93
VIM-210ENST00000637053 ARHGDIAP52565 204 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms