RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 SLC25A3Q00325 362 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MRNIPQ6NTE8 343 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 C22orf39Q6P5X5 142 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 TRIM67Q6ZTA4 783 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ZC3HC1Q86WB0 502 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ZNF687Q8N1G0 1237 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MAFAQ8NHW3 353 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 DNAJC9Q8WXX5 260 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 KIFC1Q9BW19 673 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 GATA5Q9BWX5 397 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 SLC2A11Q9BYW1 496 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 STN1Q9H668 368 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 DEC1Q9P2X7 70 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 CRYL1Q9Y2S2 319 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 NVLO15381 856 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 BNIP3LO60238 219 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 KRT36O76013 467 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 KAT7O95251 611 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 EGFP01133 1207 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 AHSGP02765 367 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 CA5AP35218 305 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 PGGT1BP53609 377 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 NSUN2Q08J23 767 aaKnown RBP eCLIP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 LAMB3Q13751 1172 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ZNF234Q14588 700 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 RFTN1Q14699 578 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ITPRIPL2Q3MIP1 535 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 LIPMQ5VYY2 423 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MDGA1Q8NFP4 955 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 HDAC10Q969S8 669 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 NXNL1Q96CM4 212 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 PHF21BQ96EK2 531 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 CDH19Q9H159 772 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MRPL46Q9H2W6 279 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 EML4Q9HC35 981 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 VPS45Q9NRW7 570 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 CACNA2D2Q9NY47 1150 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MTF2Q9Y483 593 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 WASF2Q9Y6W5 498 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 TMEM114B3SHH9 223 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 SIN3BO75182 1162 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 SMIM24O75264 130 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 HNRNPLP14866 589 aaKnown RBP eCLIP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MPSTP25325 297 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 PRKAA2P54646 552 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 ZP2Q05996 745 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 POM121L1PQ3SYA9 428 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 C9orf64Q5T6V5 341 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 LRRC8EQ6NSJ5 796 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 KIAA1211LQ6NV74 962 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 MTSS1LQ765P7 747 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 BCAP29Q9UHQ4 241 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 RPL26L1Q9UNX3 145 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 TTC28Q96AY4 2481 aa8.17□□□□□ -1.1
CACNA1A-232ENST00000636966 C10orf142B7Z368 130 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 PLK4O00444 970 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 GPR39O43194 453 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 ADAM23O75077 832 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SUPT7LO94864 414 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 IL1BP01584 269 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 ALPIP09923 528 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 VHLP40337 213 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SLC1A2P43004 574 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 IDH3AP50213 366 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 NUDT2P50583 147 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 CCNHP51946 323 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SEC13P55735 322 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 TAS2R39P59534 338 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 RHOAP61586 193 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 PON2Q15165 354 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 CDKN3Q16667 212 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 TRMT5Q32P41 509 aaKnown RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 KHDC1Q4VXA5 237 aaKnown RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 DEFB107AQ8IZN7 70 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 PIH1D2Q8WWB5 315 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 CLPTM1LQ96KA5 538 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 WDR55Q9H6Y2 383 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 ARNT2Q9HBZ2 717 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 RAP2CQ9Y3L5 183 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 RAI2Q9Y5P3 530 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 ARL5AQ9Y689 179 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SLCO1B7G3V0H7 640 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 TXNDC9O14530 226 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 HDAC3O15379 428 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SPINT1O43278 529 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 SNNO75324 88 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 NDUFS3O75489 264 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 RBP1P09455 135 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 CCDC166P0CW27 439 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 ENO3P13929 434 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 GFAPP14136 432 aa8.16□□□□□ -1.1
CACNA1A-232ENST00000636966 EPHA3P29320 983 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms