RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CLN3Q13286 438 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 XRCC4Q13426 336 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 PID1Q7Z2X4 250 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 PRICKLE2Q7Z3G6 844 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 Q8N9G6 341 aaPredicted RBP18.23■□□□□ 0.51
CLN6-214ENST00000636314 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 SRPK1Q96SB4 655 aaKnown RBP18.23■□□□□ 0.51
CLN6-214ENST00000636314 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 DESI2Q9BSY9 194 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 OSBPL8Q9BZF1 889 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 RAD18Q9NS91 495 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 VPS18Q9P253 973 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 LRIT1Q9P2V4 623 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 RSPH14Q9UHP6 348 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 APPL1Q9UKG1 709 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 EFR3BQ9Y2G0 817 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 RNF215Q9Y6U7 377 aa18.23■□□□□ 0.51
CLN6-214ENST00000636314 NUDT21O43809 227 aaKnown RBP18.22■□□□□ 0.51
CLN6-214ENST00000636314 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
CLN6-214ENST00000636314 PNLIPP16233 465 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 PTPN7P35236 360 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 PDX1P52945 283 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 MAZP56270 477 aaKnown RBP18.22■□□□□ 0.51
CLN6-214ENST00000636314 WNT3AP56704 352 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 DCDC1P59894 354 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 OTUD4Q01804 1114 aaKnown RBP18.22■□□□□ 0.51
CLN6-214ENST00000636314 BIRC2Q13490 618 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 LRP8Q14114 963 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 PYCR3Q53H96 274 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 KDELC1Q6UW63 502 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 CLEC14AQ86T13 490 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 EID2BQ96D98 161 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 FCRL5Q96RD9 977 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 HERPUD2Q9BSE4 406 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 SPATA16Q9BXB7 569 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 LRRN3Q9H3W5 708 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 TRHDEQ9UKU6 1024 aa18.22■□□□□ 0.51
CLN6-214ENST00000636314 OAS3Q9Y6K5 1087 aaKnown RBP18.22■□□□□ 0.51
CLN6-214ENST00000636314 MAST4O15021 2626 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 A0A1W2PQM1 296 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 FGF1P05230 155 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 RBL1P28749 1068 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 MLLT3P42568 568 aaPredicted RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 PEX26Q7Z412 305 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 TMC3Q7Z5M5 1100 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 SPRED1Q7Z699 444 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 CDKL3Q8IVW4 592 aaPredicted RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 GPR26Q8NDV2 337 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 IPMKQ8NFU5 416 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 ALG3Q92685 438 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 OXNAD1Q96HP4 312 aaPredicted RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 CCNL2Q96S94 520 aaPredicted RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 ZSCAN5AQ9BUG6 496 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 FSD1LQ9BXM9 530 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 EPB41L5Q9HCM4 733 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 NFKBIL1Q9UBC1 381 aaPredicted RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 ZNHIT2Q9UHR6 403 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 CNOT6Q9ULM6 557 aaKnown RBP18.21■□□□□ 0.51
CLN6-214ENST00000636314 PLEKHM1Q9Y4G2 1056 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 ST14Q9Y5Y6 855 aa18.21■□□□□ 0.51
CLN6-214ENST00000636314 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 RHPN2P1A8MT19 583 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 TJP3O95049 919 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 WISP1O95388 367 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 ECEL1O95672 775 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 ITGA2BP08514 1039 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 EIF3EP60228 445 aaKnown RBP18.2■□□□□ 0.5
CLN6-214ENST00000636314 MPP3Q13368 585 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 PDPK2PQ6A1A2 396 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 ITPRIPL1Q6GPH6 555 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 B3GNT8Q7Z7M8 397 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 C17orf82Q86X59 251 aaPredicted RBP18.2■□□□□ 0.5
CLN6-214ENST00000636314 JAMLQ86YT9 394 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 TRAM1L1Q8N609 369 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 PATE1Q8WXA2 126 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 TMEM74Q96NL1 305 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 FAM117AQ9C073 453 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 GBA3Q9H227 469 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 C10orf88Q9H8K7 445 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 RMI1Q9H9A7 625 aa18.2■□□□□ 0.5
CLN6-214ENST00000636314 HEMK1Q9Y5R4 338 aaPredicted RBP18.2■□□□□ 0.5
CLN6-214ENST00000636314 UNC13CQ8NB66 2214 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 MIF4GDA9UHW6 222 aaKnown RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 TMX2-CTNND1H3BSU7 103 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 DNAJC6O75061 913 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 STK10O94804 968 aaKnown RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 SLC25A14O95258 325 aaPredicted RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 EPOP01588 193 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 RBP3P10745 1247 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 PYGMP11217 842 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms