RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 BMPR2Q13873 1038 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 QRICH1Q2TAL8 776 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KCTD21Q4G0X4 260 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KCNMB4Q86W47 210 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 LSM14AQ8ND56 463 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ADCY4Q8NFM4 1077 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC30A5Q8TAD4 765 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 AUTS2Q8WXX7 1259 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 BAP1Q92560 729 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SNAPC3Q92966 411 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TRIM43Q96BQ3 446 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FAM111AQ96PZ2 611 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 GREM2Q9H772 168 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TM9SF3Q9HD45 589 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RPL36Q9Y3U8 105 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHB5Q9Y5E4 795 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 C2orf74A8MZ97 194 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PPP1R3GB7ZBB8 358 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 BOLA2-SMG1P6H3BVE0 249 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF14P17017 642 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RPL22P35268 128 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SEC23BQ15437 767 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM35AQ53FP2 167 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 IQCF1Q8N6M8 205 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D16Q8TBP0 767 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 STK32AQ8WU08 396 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJB3Q8WWF6 145 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ATG4AQ8WYN0 398 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 IL22Q9GZX6 179 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SDHAF2Q9NX18 166 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 OGDHLQ9ULD0 1010 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 C13orf42A0A1B0GVH6 325 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PQBP1O60828 265 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ANGPTL1O95841 491 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC2A1P11166 492 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 BMP4P12644 408 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ACO1P21399 889 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CDH3P22223 829 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 HMGCS2P54868 508 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RPP30P78346 268 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DBPQ10586 325 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DSG2Q14126 1118 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 POU6F1Q14863 301 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 BATFQ16520 125 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DCST2Q5T1A1 773 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC30A6Q6NXT4 461 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MOB1BQ7L9L4 216 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ADAMTSL2Q86TH1 951 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PM20D2Q8IYS1 436 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SAMD14Q8IZD0 417 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TREX2Q9BQ50 279 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PAK6Q9NQU5 681 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TDP1Q9NUW8 608 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 LYARQ9NX58 379 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ATF5Q9Y2D1 282 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHA6Q9Y2H5 1048 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PCDHGA10Q9Y5H3 936 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 DLG5Q8TDM6 1919 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FER1L5A0AVI2 2057 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 NOTCH3Q9UM47 2321 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RNGTTO60942 597 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ITGB3P05106 788 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ZSCAN5DPP0CG00 497 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CYP4F2P78329 520 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CYP4F3Q08477 520 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MZT1Q08AG7 82 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MERTKQ12866 999 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 EPHA7Q15375 998 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 XKR6Q5GH73 641 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SNAP47Q5SQN1 464 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 FBXO31Q5XUX0 539 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MSANTD2Q6P1R3 559 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KYAT3Q6YP21 454 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RASAL3Q86YV0 1011 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 PSTKQ8IV42 348 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 NKAPQ8N5F7 415 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF473Q8WTR7 871 aaKnown RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 RIT2Q99578 217 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 B3GNT4Q9C0J1 378 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MYNNQ9NPC7 610 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 STAP2Q9UGK3 403 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 KCNS2Q9ULS6 477 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 AK5Q9Y6K8 562 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MAU2Q9Y6X3 613 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CLUHO75153 1309 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SLC35F4A4IF30 521 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 A8MVJ9 347 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TSTD3H0UI37 97 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MID1O15344 667 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 AP2A1O95782 977 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 ELFN1P0C7U0 828 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MMP13P45452 471 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TLE2Q04725 743 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 TOB2Q14106 344 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-212ENST00000636194 IKBKEQ14164 716 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 SYNE4Q8N205 404 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 OR4A15Q8NGL6 344 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 HAPLN3Q96S86 360 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CPVLQ9H3G5 476 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CXorf56Q9H5V9 222 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms