RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ITGA3P26006 1051 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 RFTN1Q14699 578 aaPredicted RBP17.91■□□□□ 0.46
CLN6-212ENST00000636020 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 TMEM26Q6ZUK4 368 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 NLRP8Q86W28 1048 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 SCAMP4Q969E2 229 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 SCRN2Q96FV2 425 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 PLEKHG4BQ96PX9 1271 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 PSKH2Q96QS6 385 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 AGAP2Q99490 1192 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 PDE7BQ9NP56 450 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 C5AR2Q9P296 337 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 B3GNT3Q9Y2A9 372 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 COPG1Q9Y678 874 aaKnown RBP17.91■□□□□ 0.46
CLN6-212ENST00000636020 PRSS44E7EML9 344 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 SOCS5O75159 536 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 ASMTLO95671 621 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
CLN6-212ENST00000636020 ACP5P13686 325 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 AMD1P17707 334 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 NELFEP18615 380 aaKnown RBP17.9■□□□□ 0.46
CLN6-212ENST00000636020 CYB5D1Q6P9G0 228 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 SNX21Q969T3 373 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 MCCC1Q96RQ3 725 aaPredicted RBP17.9■□□□□ 0.46
CLN6-212ENST00000636020 VPS18Q9P253 973 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 ITGB1BP2Q9UKP3 347 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 RARRES3Q9UL19 164 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 FZD10Q9ULW2 581 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 NTNG1Q9Y2I2 539 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
CLN6-212ENST00000636020 MDC1Q14676 2089 aaKnown RBP17.9■□□□□ 0.46
CLN6-212ENST00000636020 A0A0U1RQS6 177 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 ZG16O60844 167 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 ATP1A1P05023 1023 aaKnown RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 MMEP08473 750 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 XRCC1P18887 633 aaPredicted RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 MMP8P22894 467 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 HNRNPH3P31942 346 aaKnown RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 RFC1P35251 1148 aaPredicted RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 RENBPP51606 427 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 PAK1Q13153 545 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 TMCO4Q5TGY1 634 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 DPY19L2P1Q6NXN4 242 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 ZNF517Q6ZMY9 492 aaPredicted RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 ZNF765Q7L2R6 523 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 NOP9Q86U38 636 aaKnown RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 TMEM102Q8N9M5 508 aaPredicted RBP17.89■□□□□ 0.45
CLN6-212ENST00000636020 ST6GALNAC3Q8NDV1 305 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 PKDREJQ9NTG1 2253 aa17.89■□□□□ 0.45
CLN6-212ENST00000636020 PYGLP06737 847 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 FOLR1P15328 257 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 PDE1BQ01064 536 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 TUBB3Q13509 450 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 IZUMO3Q5VZ72 239 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 SCYL2Q6P3W7 929 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 ARHGAP36Q6ZRI8 547 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 MED25Q71SY5 747 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 GDF7Q7Z4P5 450 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 ARFGAP1Q8N6T3 406 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 UBE2Q2Q8WVN8 375 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 INPP5DQ92835 1189 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 SP110Q9HB58 689 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 GDPD2Q9HCC8 539 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 TMEM63CQ9P1W3 806 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 KIAA1468Q9P260 1216 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 PPIL1Q9Y3C6 166 aa17.88■□□□□ 0.45
CLN6-212ENST00000636020 NIPBLQ6KC79 2804 aaeCLIP17.87■□□□□ 0.45
CLN6-212ENST00000636020 FGFR1OPO95684 399 aaKnown RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 HTR7P34969 479 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 SLC19A1P41440 591 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 VAV2P52735 878 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 TPI1P60174 286 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 IL10RBQ08334 325 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 TRAF2Q12933 501 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 RAPSNQ13702 412 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 TESK1Q15569 626 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 VWA5B1Q5TIE3 1220 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 FAM92BQ6ZTR7 304 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 BPHLQ86WA6 291 aaPredicted RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 CREBRFQ8IUR6 639 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 ARHGAP12Q8IWW6 846 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 SIDT2Q8NBJ9 832 aaKnown RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 RSC1A1Q92681 617 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 MR1Q95460 341 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 ZDHHC12Q96GR4 267 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 SLC41A2Q96JW4 573 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 RMI1Q9H9A7 625 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 SCHIP1Q9P0W5 487 aaPredicted RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 SEMA5BQ9P283 1151 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 ZNF624Q9P2J8 865 aaPredicted RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 EPHA6Q9UF33 1036 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 HOOK1Q9UJC3 728 aaKnown RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 CNOT6Q9ULM6 557 aaKnown RBP17.87■□□□□ 0.45
CLN6-212ENST00000636020 OSGIN2Q9Y236 505 aa17.87■□□□□ 0.45
CLN6-212ENST00000636020 ZGRF1Q86YA3 2104 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
CLN6-212ENST00000636020 VIPP01282 170 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 KRT3P12035 628 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms