RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ARNTP27540 789 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 GPR1P46091 355 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 DCDC1P59894 354 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 XIAPP98170 497 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 PEX6Q13608 980 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 THOC5Q13769 683 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 IRF4Q15306 451 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 HENMT1Q5T8I9 393 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 TRMT10BQ6PF06 316 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 CEP68Q76N32 757 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ARMCX6Q7L4S7 300 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 LPCAT2Q7L5N7 544 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 TAS2R42Q7RTR8 314 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 CPLX4Q7Z7G2 160 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 KCNMB4Q86W47 210 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 GBP7Q8N8V2 638 aaPredicted RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 OR4L1Q8NH43 312 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 UHMK1Q8TAS1 419 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ASB12Q8WXK4 309 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 AGAP2Q99490 1192 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ZSCAN5AQ9BUG6 496 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 PCED1AQ9H1Q7 454 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ASB8Q9H765 288 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 MBNL1Q9NR56 388 aaKnown RBP14.35□□□□□ -0.11
LINC00339-208ENST00000634934 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
LINC00339-208ENST00000634934 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 H0YHG0 523 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 H7C0S8 307 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 K7ESM1 405 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 GAPDHSO14556 408 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 GPR39O43194 453 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 HRO43593 1189 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A9O60656 530 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 SPAG6O75602 509 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 PRSS56P0CW18 603 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 TSHRP16473 764 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A6P19224 532 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 ITGALP20701 1170 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A1P22309 533 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A4P22310 534 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 HNRNPA2B1P22626 353 aaKnown RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 AKT2P31751 481 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 PHBP35232 272 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A3P35503 534 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A5P35504 534 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 DPTQ07507 201 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 AGERQ15109 404 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 ATP13A5Q4VNC0 1218 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 FASTKD1Q53R41 847 aaKnown RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 HSP90AA5PQ58FG0 334 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 NEPROQ6NW34 567 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 TRAM1L1Q8N609 369 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 TP53I13Q8NBR0 393 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 PLA2G15Q8NCC3 412 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 ZNF398Q8TD17 642 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 FOXJ1Q92949 421 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 CERS2Q96G23 380 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A7Q9HAW7 530 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A10Q9HAW8 530 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 UGT1A8Q9HAW9 530 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 CATSPERZQ9NTU4 200 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 INTS9Q9NV88 658 aaKnown RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-208ENST00000634934 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
LINC00339-208ENST00000634934 A0A1W2PPC4 97 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 TCRBV9S1A1TA0A576 114 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CFAP73A6NFT4 308 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 C10orf142B7Z368 130 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CHUKO15111 745 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CD3EAPO15446 510 aaKnown RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 LILRB5O75023 590 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 STX2P32856 288 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CLDN2P57739 230 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 CACNG1Q06432 222 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 MGAT5Q09328 741 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 NFATC2Q13469 925 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 ITGA9Q13797 1035 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 INPP5AQ14642 412 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 LPAL2Q16609 132 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 PNCKQ6P2M8 343 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 SNX20Q7Z614 316 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 SLC41A1Q8IVJ1 513 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 FBF1Q8TES7 1133 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 SGSM3Q96HU1 749 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 SERAC1Q96JX3 654 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 KLF6Q99612 283 aaPredicted RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 MIR1-1HGQ9H1L0 117 aa14.33□□□□□ -0.12
LINC00339-208ENST00000634934 DUSP15Q9H1R2 295 aaPredicted RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 IARS2Q9NSE4 1012 aaKnown RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 EIF2B4Q9UI10 523 aaKnown RBP14.33□□□□□ -0.12
LINC00339-208ENST00000634934 SLC12A4Q9UP95 1085 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms