RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ANXA2RQ3ZCQ2 193 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC9B1Q4ZJI4 515 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 RILPL1Q5EBL4 403 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CFAP58Q5T655 872 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 VWA5B1Q5TIE3 1220 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 NAA16Q6N069 864 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM81Q6P7N7 255 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM65Q6PI78 240 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC30A9Q6PML9 568 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF474Q6S9Z5 364 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TRIM72Q6ZMU5 477 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 DCDC5Q6ZRR9 648 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 ENOSF1Q7L5Y1 443 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 MDGA2Q7Z553 956 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 FOXP4Q8IVH2 680 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM9BQ8IZU0 186 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 TTC39CQ8N584 583 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 C11orf65Q8NCR3 313 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SETD9Q8NE22 299 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM110DQ8TAY7 271 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 KLHL29Q96CT2 875 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 THOC3Q96J01 351 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 FYTTD1Q96QD9 318 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CDX2Q99626 313 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 ABHD14AQ9BUJ0 271 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 GATA5Q9BWX5 397 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 MOV10L1Q9BXT6 1211 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 CADM1Q9BY67 442 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SPATC1LQ9H0A9 340 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 UPF3AQ9H1J1 476 aaKnown RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 RPAP3Q9H6T3 665 aaPredicted RBP2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 PCDHB16Q9NRJ7 776 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 IL1RAPL1Q9NZN1 696 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 PEMTQ9UBM1 199 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SLCO3A1Q9UIG8 710 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 KCNE2Q9Y6J6 123 aa2.59□□□□□ -1.99
SMARCB1-208ENST00000634926 SYNRGQ9UMZ2 1314 aa2.59□□□□□ -2
SMARCB1-208ENST00000634926 TET1Q8NFU7 2136 aa2.59□□□□□ -2
SMARCB1-208ENST00000634926 LOC400499M0QZD8 3231 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 TEX13CA0A0J9YWL9 993 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 OR6C68A6NDL8 312 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 LIPT2A6NK58 231 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 AGAP14A8MT82 685 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 B4DLN1 442 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 KCNJ18B7U540 433 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ATP2A1O14983 1001 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 LDLRAD4O15165 306 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 VILLO15195 856 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 WDR46O15213 610 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 STRNO43815 780 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CEP104O60308 925 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EXOC3O60645 756 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 BAG3O95817 575 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EIF2S1P05198 315 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 SPARCP09486 303 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CSH1P0DML2 217 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CSH2P0DML3 217 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ZNF8P17098 575 aaPredicted RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 NFKBIAP25963 317 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 TYK2P29597 1187 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 FMO4P31512 558 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 IDUAP35475 653 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ACTN2P35609 894 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 NOVP48745 357 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 NLRP5P59047 1200 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 HILS1P60008 231 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 MC1RQ01726 317 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 POU5F1Q01860 360 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 RHAGQ02094 409 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CYP4A11Q02928 519 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ZBTB16Q05516 673 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 EPS8Q12929 822 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CHAF1BQ13112 559 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 SLC14A1Q13336 389 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 SHHQ15465 462 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CCDC96Q2M329 555 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 DUSP28Q4G0W2 176 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 FAM133BQ5BKY9 247 aaKnown RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 ZNF667Q5HYK9 610 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 MFSD4BQ5TF39 518 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 GFI1BQ5VTD9 330 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CDC73Q6P1J9 531 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 NCEH1Q6PIU2 408 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CYP20A1Q6UW02 462 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 RANBP10Q6VN20 620 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 IKBIPQ70UQ0 350 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 KRT74Q7RTS7 529 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 RNF144BQ7Z419 303 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 KRT77Q7Z794 578 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 ADHFE1Q8IWW8 467 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 CPXM2Q8N436 756 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 PAQR4Q8N4S7 273 aaPredicted RBP2.58□□□□□ -2
SMARCB1-208ENST00000634926 SCAIQ8N9R8 606 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 SLC44A5Q8NCS7 719 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 KLHDC9Q8NEP7 349 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 OR52N4Q8NGI2 321 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 B4GALNT2Q8NHY0 566 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 NEK9Q8TD19 979 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 SCFD2Q8WU76 684 aa2.58□□□□□ -2
SMARCB1-208ENST00000634926 DNASE2BQ8WZ79 361 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms