RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-223	ENST00000627440	SFRP1	Q8N474	314 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	TMEM161B	Q8NDZ6	487 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	GATAD1	Q8WUU5	269 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	DDB2	Q92466	427 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	MMTAG2	Q9BU76	263 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	TBC1D10A	Q9BXI6	508 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	C17orf75	Q9HAS0	396 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	NCOA5	Q9HCD5	579 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	SARS2	Q9NP81	518 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	SAMSN1	Q9NSI8	373 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PSD3	Q9NYI0	1048 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	SFMBT1	Q9UHJ3	866 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	GNPTG	Q9UJJ9	305 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	HRH3	Q9Y5N1	445 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	ALG6	Q9Y672	507 aa		6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PHF3	Q92576	2039 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-223	ENST00000627440	PLXNB1	O43157	2135 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	CCDC66	A2RUB6	948 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	PPP1R12A	O14974	1030 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	VEGFD	O43915	354 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	PALM	O75781	387 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	EBLN1	P0CF75	366 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	AGXT	P21549	392 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	SRP14	P37108	136 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	ASCL1	P50553	236 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	CTBS	Q01459	385 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TOB2	Q14106	344 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	ZNF766	Q5HY98	468 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	MLIP	Q5VWP3	458 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	KIF18B	Q86Y91	864 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	SIAH3	Q8IW03	269 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TRMT2A	Q8IZ69	625 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	DAW1	Q8N136	415 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	BANP	Q8N9N5	519 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	OR2Y1	Q8NGV0	311 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TEKT4	Q8WW24	435 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	KAT2A	Q92830	837 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	FUBP1	Q96AE4	644 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	HPDL	Q96IR7	371 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TNFRSF13C	Q96RJ3	184 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	C17orf62	Q9BQA9	187 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	PHACTR1	Q9C0D0	580 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	RBSN	Q9H1K0	784 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TNKS2	Q9H2K2	1166 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	CSNK1G1	Q9HCP0	422 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	MRS2	Q9HD23	443 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	KCND1	Q9NSA2	647 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	PCMTD2	Q9NV79	361 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	PPP4R2	Q9NY27	417 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	TAS2R14	Q9NYV8	317 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	VPS54	Q9P1Q0	977 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	B4GALT7	Q9UBV7	327 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	GPN3	Q9UHW5	284 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	IKZF3	Q9UKT9	509 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440	ADGRG1	Q9Y653	693 aa		6.1	□□□□□ -1.43
SNAP23-223	ENST00000627440		A0A0G2JNJ9	132 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	KRTAP9-6	A0A140TA67	174 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	ACSL4	O60488	711 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	MED24	O75448	989 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	COL6A2	P12110	1019 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	SRC	P12931	536 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	AMD1	P17707	334 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	GNPDA1	P46926	289 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	ARL4D	P49703	201 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	ARSE	P51690	589 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	ZFYVE27	Q5T4F4	411 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	FAM92B	Q6ZTR7	304 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	PLEKHM3	Q6ZWE6	761 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	PEG10	Q86TG7	708 aa	Known RBP	6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	FUK	Q8N0W3	1084 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	ARHGAP18	Q8N392	663 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	OR8K5	Q8NH50	307 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	CXorf38	Q8TB03	319 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	UBE2F	Q969M7	185 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	PTER	Q96BW5	349 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	NAP1L4	Q99733	375 aa	Known RBP	6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	SH3GL2	Q99962	352 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	WRAP53	Q9BUR4	548 aa	Known RBP	6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	SLC7A5P2	Q9GIP4	190 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	NOL6	Q9H6R4	1146 aa	Known RBP	6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	OLA1	Q9NTK5	396 aa	Known RBP	6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440		Q9UFV3	132 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	SIX4	Q9UIU6	781 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	COQ6	Q9Y2Z9	468 aa		6.09	□□□□□ -1.43
SNAP23-223	ENST00000627440	LYST	Q99698	3801 aa		6.09	□□□□□ -1.44
SNAP23-223	ENST00000627440		A0A1B0GTH9	108 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	SLC35F4	A4IF30	521 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	OR5H15	A6NDH6	313 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	LILRA5	A6NI73	299 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	C2orf81	A6NN90	581 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	C16orf96	A6NNT2	1141 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	GOLGA8A	A7E2F4	631 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	GOLGA8B	A8MQT2	603 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	CASK	O14936	926 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	TMCC2	O75069	709 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	USP1	O94782	785 aa		6.08	□□□□□ -1.44
SNAP23-223	ENST00000627440	JCHAIN	P01591	159 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms