RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 C6orf183Q5T699 404 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PIM3Q86V86 326 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 OSTM1Q86WC4 334 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PROSER1Q86XN7 944 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 AURKBQ96GD4 344 aaPredicted RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 NSMCE2Q96MF7 247 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 NSUN5Q96P11 429 aaKnown RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 COLEC11Q9BWP8 271 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 ENTPD7Q9NQZ7 604 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 FAM118AQ9NWS6 357 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PIRO00625 290 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 GMNNO75496 209 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 EEDO75530 441 aaKnown RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 PCNAP12004 261 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 BMP4P12644 408 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 ITIH1P19827 911 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 TPD52P55327 224 aaPredicted RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 TPTEP56180 551 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 MAP3K7CLP57077 242 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 FXNQ16595 210 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 TTC23Q5W5X9 447 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 CTU1Q7Z7A3 348 aaKnown RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 SCML4Q8N228 414 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 PIK3C3Q8NEB9 887 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 OR52K2Q8NGK3 314 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 CALML6Q8TD86 181 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 TSPEARQ8WU66 669 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 MRGPRX2Q96LB1 330 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 ASB2Q96Q27 587 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
LDB3-209ENST00000623056 KLQ9UEF7 1012 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 SNX5Q9Y5X3 404 aa14.03□□□□□ -0.16
LDB3-209ENST00000623056 RALGAPA2Q2PPJ7 1873 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 C1RP00736 705 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 EIF2S1P05198 315 aaKnown RBP14.02□□□□□ -0.16
LDB3-209ENST00000623056 TXNP10599 105 aaKnown RBP14.02□□□□□ -0.16
LDB3-209ENST00000623056 AGXTP21549 392 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 CCNCP24863 283 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 HNRNPFP52597 415 aaKnown RBP14.02□□□□□ -0.16
LDB3-209ENST00000623056 ECT2LQ008S8 904 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 ZNF33AQ06730 810 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 SF3B4Q15427 424 aaKnown RBP eCLIP14.02□□□□□ -0.16
LDB3-209ENST00000623056 GLYATQ6IB77 296 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 LINC00299Q6ZSB3 139 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 NANOGNBQ7Z5D8 188 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 LDB1Q86U70 411 aaPredicted RBP14.02□□□□□ -0.16
LDB3-209ENST00000623056 SULF1Q8IWU6 871 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 ZCCHC7Q8N3Z6 543 aaKnown RBP14.02□□□□□ -0.16
LDB3-209ENST00000623056 ATPAF2Q8N5M1 289 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 NSMCE3Q96MG7 304 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 MBOAT4Q96T53 435 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 IL12RB2Q99665 862 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 EHD1Q9H4M9 534 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 WDCPQ9H6R7 721 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 RMND5AQ9H871 391 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 SMURF2Q9HAU4 748 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 POLE4Q9NR33 117 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 GDAP2Q9NXN4 497 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 RNF181Q9P0P0 153 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 KLHL3Q9UH77 587 aa14.02□□□□□ -0.16
LDB3-209ENST00000623056 TYW5A2RUC4 315 aaKnown RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 CCDC154A6NI56 674 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 A8MU76 341 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 LSM1O15116 133 aaKnown RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 TBC1D4O60343 1298 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 NDUFS2O75306 463 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 TULP3O75386 442 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 DNAJB5O75953 348 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 GABARAPO95166 117 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 HPRP00739 348 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 PCMT1P22061 227 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 PIGAP37287 484 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 DAOAP59103 153 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 CD47Q08722 323 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 PAGE2BQ5JRK9 111 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 LAIR2Q6ISS4 152 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 RANBP10Q6VN20 620 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 CYP2U1Q7Z449 544 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 RBM23Q86U06 439 aaKnown RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 SLC22A16Q86VW1 577 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 RALGPS2Q86X27 583 aaPredicted RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 RYBPQ8N488 228 aaPredicted RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 TMEM199Q8N511 208 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 NDNFQ8TB73 568 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 PGAP3Q96FM1 320 aaPredicted RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 NODALQ96S42 347 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 MED10Q9BTT4 135 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 AMBRA1Q9C0C7 1298 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 SPATC1LQ9H0A9 340 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 FBXO8Q9NRD0 319 aa14.02□□□□□ -0.17
LDB3-209ENST00000623056 LEF1Q9UJU2 399 aaPredicted RBP14.02□□□□□ -0.17
LDB3-209ENST00000623056 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 A0A1B0GTL3 188 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms