RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 BPIFB1Q8TDL5 484 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 SGF29Q96ES7 293 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 LATS2Q9NRM7 1088 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 TAS2R1Q9NYW7 299 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 GTSE1Q9NYZ3 720 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ARMCX1Q9P291 453 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 NFKBIL1Q9UBC1 381 aaPredicted RBP16.23■□□□□ 0.19
LDB3-208ENST00000623007 B2RBV5 119 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 QSOX1O00391 747 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 GIPC1O14908 333 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 CHUKO15111 745 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 DCDC1P59894 354 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 MAPRE2Q15555 327 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 RAB30Q15771 203 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 ANKS6Q68DC2 871 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 TTC23LQ6PF05 361 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 OR6K2Q8NGY2 324 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 RP9Q8TA86 221 aaKnown RBP16.22■□□□□ 0.19
LDB3-208ENST00000623007 CD200R1Q8TD46 325 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 PTERQ96BW5 349 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 ZDHHC6Q9H6R6 413 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 MEAF6Q9HAF1 191 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 TRPV4Q9HBA0 871 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 IL26Q9NPH9 171 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 NUDT4Q9NZJ9 180 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 MED16Q9Y2X0 877 aa16.22■□□□□ 0.19
LDB3-208ENST00000623007 KPNA5O15131 536 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 GRID2O43424 1007 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 SNX2O60749 519 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 CLDN7O95471 211 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 S100BP04271 92 aaPredicted RBP16.21■□□□□ 0.19
LDB3-208ENST00000623007 BPIP17213 487 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 STK19P49842 368 aaPredicted RBP16.21■□□□□ 0.19
LDB3-208ENST00000623007 MXRA7P84157 204 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 CTSL3PQ5NE16 218 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 CRTC1Q6UUV9 634 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 FAM151BQ6UXP7 276 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 NXPE1Q8N323 547 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 PTGR2Q8N8N7 351 aaPredicted RBP16.21■□□□□ 0.19
LDB3-208ENST00000623007 SMARCD2Q92925 531 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 PBXIP1Q96AQ6 731 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 PHF21BQ96EK2 531 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 LINC00597Q9H2U6 94 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 ZDHHC3Q9NYG2 299 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 MSRAQ9UJ68 235 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 WNT6Q9Y6F9 365 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 NUMBLQ9Y6R0 609 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
LDB3-208ENST00000623007 SUPT3HB4E1H0 165 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.18
LDB3-208ENST00000623007 SUPT3HO75486 399 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 ENO3P13929 434 aaPredicted RBP16.21■□□□□ 0.18
LDB3-208ENST00000623007 CTSOP43234 321 aaPredicted RBP16.21■□□□□ 0.18
LDB3-208ENST00000623007 CLCN7P51798 805 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 RAP1GDS1P52306 607 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 LCP2Q13094 533 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 SLC9B1Q4ZJI4 515 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 CDKL4Q5MAI5 379 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 MYO1HQ8N1T3 1032 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 OR2A12Q8NGT7 310 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 EID2BQ96D98 161 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 CYP4F12Q9HCS2 524 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 SMOXQ9NWM0 555 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 BAIAP2L1Q9UHR4 511 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 PLA2G4CQ9UP65 541 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.18
LDB3-208ENST00000623007 SCN8AQ9UQD0 1980 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 NPIPB15A6NHN6 443 aaPredicted RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 CFAP99D6REC4 459 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 PSMD11O00231 422 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 BTN3A1O00481 513 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 CIB2O75838 187 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 CSPG5O95196 566 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 CHEK2O96017 543 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 CYP17A1P05093 508 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 UGT2B4P06133 528 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 MTHFD2P13995 350 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 FSHRP23945 695 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 VIPR1P32241 457 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 NTHL1P78549 312 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 PFKFB4Q16877 469 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 EML3Q32P44 896 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 LSM12Q3MHD2 195 aaKnown RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 SETMARQ53H47 684 aaPredicted RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 LRRC66Q68CR7 880 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 ASTLQ6HA08 431 aaPredicted RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 ATG14Q6ZNE5 492 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 GPSM1Q86YR5 675 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 TREML1Q86YW5 311 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 VN1R2Q8NFZ6 395 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 RIN3Q8TB24 985 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 FRS2Q8WU20 508 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
LDB3-208ENST00000623007 LINGO1Q96FE5 620 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 ZSWIM3Q96MP5 696 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 COPS8Q99627 209 aa16.2■□□□□ 0.18
LDB3-208ENST00000623007 RTKNQ9BST9 563 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms