RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TSNQ15631 228 aaKnown RBP9.19□□□□□ -0.94
GGA3-223ENST00000621870 MSANTD2Q6P1R3 559 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 IYDQ6PHW0 289 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 LYSMD3Q7Z3D4 306 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 C16orf62Q7Z3J2 963 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 ARPINQ7Z6K5 226 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 DEFB119Q8N690 84 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 CLDN19Q8N6F1 224 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 CD101Q93033 1021 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 FCRL5Q96RD9 977 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 WDR55Q9H6Y2 383 aaPredicted RBP9.19□□□□□ -0.94
GGA3-223ENST00000621870 POLR3BQ9NW08 1133 aaPredicted RBP9.19□□□□□ -0.94
GGA3-223ENST00000621870 ADPRHL2Q9NX46 363 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 PRKAB1Q9Y478 270 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 MYH13Q9UKX3 1938 aa9.19□□□□□ -0.94
GGA3-223ENST00000621870 MYH11P35749 1972 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 AXIN1O15169 862 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SLC7A4O43246 635 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 DLDP09622 509 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 FASP25445 335 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 BIKQ13323 160 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 ZNF460Q14592 562 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 RFTN1Q14699 578 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 PDK4Q16654 411 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SPDYCQ5MJ68 293 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 DEPDC1Q5TB30 811 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SLC30A9Q6PML9 568 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 AHI1Q8N157 1196 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 TMEM130Q8N3G9 435 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 MCMBPQ9BTE3 642 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 YIPF3Q9GZM5 350 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 CDH19Q9H159 772 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 KCNK4Q9NYG8 393 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 OR6A2O95222 327 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 UBTFL6P0CB48 400 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 GKP32189 559 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 PTGER3P43115 390 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 KLC1Q07866 573 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 STX4Q12846 297 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 PLEKHG6Q3KR16 790 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 C9orf64Q5T6V5 341 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 NCBP2-AS2Q69YL0 99 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 FSTL4Q6MZW2 842 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 C14orf80Q86SX3 495 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SAMD11Q96NU1 681 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 TCF12Q99081 682 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 CCT7Q99832 543 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 RIOK2Q9BVS4 552 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 PNPLA8Q9NP80 782 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 KRCC1Q9NPI7 259 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 DZANK1Q9NVP4 752 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 IGSF9Q9P2J2 1179 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 CNOT1A5YKK6 2376 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 SPEF2Q9C093 1822 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 MBLAC1A4D2B0 266 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 TK2O00142 265 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 MMP20O60882 483 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 IPO13O94829 963 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 PAK4O96013 591 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 ESR1P03372 595 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 GNPDA1P46926 289 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 HADHBP55084 474 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 GHRHRQ02643 423 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 RUNX1T1Q06455 604 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 PPIDQ08752 370 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 CHIT1Q13231 466 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 ASTE1Q2TB18 679 aaPredicted RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 ARCQ7LC44 396 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 CUZD1Q86UP6 607 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 MREGQ8N565 214 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 CNBD2Q96M20 576 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 OSBPL6Q9BZF3 934 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 INTS7Q9NVH2 962 aaKnown RBP9.18□□□□□ -0.94
GGA3-223ENST00000621870 PNPOQ9NVS9 261 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 SIRPGQ9P1W8 387 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 ZNF711Q9Y462 761 aa9.18□□□□□ -0.94
GGA3-223ENST00000621870 PFDN1O60925 122 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.941e-6■■■■■ 28.6
GGA3-223ENST00000621870 CLDN7O95471 211 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 LDLRP01130 860 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 GABRB2P47870 512 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 LIMK2P53671 638 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 MANFP55145 182 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 AAK1Q2M2I8 961 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 GPAT3Q53EU6 434 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 NIPA2Q8N8Q9 360 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ITFG1Q8TB96 612 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ABTB1Q969K4 478 aaPredicted RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 PYCR2Q96C36 320 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 CDKN2AIPNLQ96HQ2 116 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 CCDC177Q9NQR7 707 aaPredicted RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 CFAP20Q9Y6A4 193 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 ZDBF2Q9HCK1 2354 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 A0A0D9SEW6 157 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms