RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LINGO3P0C6S8 592 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 TPBGLP0DKB5 382 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 SHHQ15465 462 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CARD16Q5EG05 197 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 RARS2Q5T160 578 aaKnown RBP9.87□□□□□ -0.83
VTA1-205ENST00000620996 ISCA2Q86U28 154 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 AFAP1L2Q8N4X5 818 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CLDN19Q8N6F1 224 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 INPP5DQ92835 1189 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CCDC126Q96EE4 140 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 PTCD3Q96EY7 689 aaKnown RBP9.87□□□□□ -0.83
VTA1-205ENST00000620996 UBXN10Q96LJ8 280 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 SLC30A3Q99726 388 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 BOCQ9BWV1 1114 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 SUV39H2Q9H5I1 410 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 EML4Q9HC35 981 aaKnown RBP9.87□□□□□ -0.83
VTA1-205ENST00000620996 FAM8A1Q9UBU6 413 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 RIMKLBQ9ULI2 386 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 C5orf42Q9H799 3197 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CHD9Q3L8U1 2897 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 GLYATL1P3A0A0U1RQE8 302 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 TTC34A8MYJ7 566 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
VTA1-205ENST00000620996 HMGCLP35914 325 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 ZNF77Q15935 545 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 TMEM198Q66K66 360 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 LRRC66Q68CR7 880 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CLEC6AQ6EIG7 209 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 USP45Q70EL2 814 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 FRA10AC1Q70Z53 315 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 GALNT7Q86SF2 657 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 METTL3Q86U44 580 aaKnown RBP9.87□□□□□ -0.83
VTA1-205ENST00000620996 CUZD1Q86UP6 607 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 SLC22A9Q8IVM8 553 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 FBXO27Q8NI29 283 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 TCF12Q99081 682 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 TTC1Q99614 292 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 DPP7Q9UHL4 492 aa9.87□□□□□ -0.83
VTA1-205ENST00000620996 CORO1CQ9ULV4 474 aaPredicted RBP9.87□□□□□ -0.83
VTA1-205ENST00000620996 H0Y3Z8 333 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 SNX2O60749 519 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 OBSL1O75147 1896 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ZNF821O75541 412 aaPredicted RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 HOXB8P17481 243 aaPredicted RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 PGM1P36871 562 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 MAGEA8P43361 318 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CHRNA6Q15825 494 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 RALGPS1Q5JS13 557 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 EPGNQ6UW88 154 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 LSMEM2Q8N112 164 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 PHTF2Q8N3S3 785 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 FBXO39Q8N4B4 442 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 LEMD2Q8NC56 503 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 EEF1AKMT1Q8WVE0 214 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 SKA2Q8WVK7 121 aaPredicted RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 UTP4Q969X6 686 aaKnown RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 ESAMQ96AP7 390 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 MIPEPQ99797 713 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 EBF3Q9H4W6 596 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CD274Q9NZQ7 290 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 LNPEPQ9UIQ6 1025 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 SLC8A2Q9UPR5 921 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ANKRD36A6QL64 1941 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CAPN8A6NHC0 703 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 TRAFD1O14545 582 aaPredicted RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 SOCS5O75159 536 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 RB1P06400 928 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ARSAP15289 507 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 PFKLP17858 780 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 FUT4P22083 530 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 EPHA5P54756 1037 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 IL2P60568 153 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CUL3Q13618 768 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ARHGEF7Q14155 803 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CTSL3PQ5NE16 218 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 RFLNAQ6ZTI6 216 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 DET1Q7L5Y6 550 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ADGRG2Q8IZP9 1017 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ZNF707Q96C28 371 aaPredicted RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 ZNF570Q96NI8 536 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 THTPAQ9BU02 230 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 CCDC106Q9BWC9 280 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 YBX2Q9Y2T7 364 aaKnown RBP9.86□□□□□ -0.83
VTA1-205ENST00000620996 CHD5Q8TDI0 1954 aa9.86□□□□□ -0.83
VTA1-205ENST00000620996 MYO9BQ13459 2157 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 RFXAPO00287 272 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 MATN2O00339 956 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 PRMT5O14744 637 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 NPHS1O60500 1241 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 HNRNPCL1O60812 293 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 POP4O95707 220 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 PENKP01210 267 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 ZNF7P17097 686 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 BPIP17213 487 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 PPARGP37231 505 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 SPAM1P38567 509 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 PTGER3P43115 390 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 DGKGP49619 791 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms