RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 RDH11Q8TC12 318 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 KCNV2Q8TDN2 545 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 RAB7BQ96AH8 199 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 FAM50BQ9Y247 325 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 ADH1BP00325 375 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 CHRM3P20309 590 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 RPS3P23396 243 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 ITIH4Q14624 930 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 PCLAFQ15004 111 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 CHI3L2Q15782 390 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 ATP13A5Q4VNC0 1218 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 CTSL3PQ5NE16 218 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 GKAP1Q5VSY0 366 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 RFLNAQ6ZTI6 216 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 Q6ZVL8 140 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 ZNF771Q7L3S4 317 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 FSTL5Q8N475 847 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 SPATA6LQ8N4H0 392 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 EZH1Q92800 747 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 KCNJ9Q92806 393 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 FAM136AQ96C01 138 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 WRAP53Q9BUR4 548 aaKnown RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 HDAC8Q9BY41 377 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 RSPH9Q9H1X1 276 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 P2RY12Q9H244 342 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 SIRPGQ9P1W8 387 aa16.44■□□□□ 0.22
PCGF3-213ENST00000620529 NFKBIL1Q9UBC1 381 aaPredicted RBP16.44■□□□□ 0.22
PCGF3-213ENST00000620529 AGAP14A8MT82 685 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 H3BMM5 538 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 KLF11O14901 512 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 MYL2P10916 166 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 GLULP15104 373 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ZNF37AP17032 561 aaPredicted RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ALDH3A1P30838 453 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ETV3P41162 512 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 LIG3P49916 1009 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 SATB1Q01826 763 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 DLG1Q12959 904 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 CST6Q15828 149 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 LEXMQ3ZCV2 418 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ZNF776Q68DI1 518 aaPredicted RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 RAVER1Q8IY67 606 aaKnown RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 HEXDCQ8WVB3 486 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 GRAMD1AQ96CP6 724 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 UBXN10Q96LJ8 280 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 COPS8Q99627 209 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ZSCAN5AQ9BUG6 496 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 ZDHHC3Q9NYG2 299 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 CPSF2Q9P2I0 782 aaKnown RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 XPR1Q9UBH6 696 aa16.43■□□□□ 0.22
PCGF3-213ENST00000620529 TRMT6Q9UJA5 497 aaKnown RBP16.43■□□□□ 0.22
PCGF3-213ENST00000620529 TK2O00142 265 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 PLK4O00444 970 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 WNT9AO14904 365 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 NIPSNAP2O75323 286 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 RBP1P09455 135 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 CD9P21926 228 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 P2RY2P41231 377 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 SKIV2L2P42285 1042 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 NSG1P42857 185 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 ACAP2Q15057 778 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 PTCRAQ6ISU1 281 aaPredicted RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 GPR153Q6NV75 609 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 CACUL1Q86Y37 369 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 C10orf107Q8IVU9 208 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 NRSN1Q8IZ57 195 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 TRAM1L1Q8N609 369 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 DTX3LQ8TDB6 740 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 GPR21Q99679 349 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 BOCQ9BWV1 1114 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 TSSK1BQ9BXA7 367 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 UNKQ9C0B0 810 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 SLCO1B3Q9NPD5 702 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 IGSF5Q9NSI5 407 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 AREL1O15033 823 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 MID1O15344 667 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 EDF1O60869 148 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 WISP3O95389 354 aaPredicted RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 C5AR1P21730 350 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 TIAL1Q01085 375 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 HENMT1Q5T8I9 393 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 TMEM207Q6UWW9 146 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 TECPR1Q7Z6L1 1165 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 NKAPQ8N5F7 415 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 IL17RCQ8NAC3 791 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 ANKRD49Q8WVL7 239 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 SCAMP4Q969E2 229 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 GPR78Q96P69 363 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 GABRG3Q99928 467 aa16.42■□□□□ 0.22
PCGF3-213ENST00000620529 ELAC2Q9BQ52 826 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 SARS2Q9NP81 518 aaKnown RBP16.42■□□□□ 0.22
PCGF3-213ENST00000620529 SMOXQ9NWM0 555 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms