RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SH3BGRP55822 239 aaPredicted RBP15.94■□□□□ 0.14
DKC1-213ENST00000620277 ZRANB3Q5FWF4 1079 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 NANOGP8Q6NSW7 305 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 GALNT18Q6P9A2 607 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 LINGO4Q6UY18 593 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 PATL1Q86TB9 770 aaKnown RBP15.94■□□□□ 0.14
DKC1-213ENST00000620277 SYVN1Q86TM6 617 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 OR6K2Q8NGY2 324 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 GIPC2Q8TF65 315 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 CENPNQ96H22 339 aaPredicted RBP15.94■□□□□ 0.14
DKC1-213ENST00000620277 NANOGQ9H9S0 305 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 IFT80Q9P2H3 777 aaPredicted RBP15.94■□□□□ 0.14
DKC1-213ENST00000620277 VPS4AQ9UN37 437 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 INVSQ9Y283 1065 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 CORINQ9Y5Q5 1042 aa15.94■□□□□ 0.14
DKC1-213ENST00000620277 B4GALT3O60512 393 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 NDUFS3O75489 264 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 CYBBP04839 570 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 FSHRP23945 695 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 AIF1P55008 147 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 PHEXP78562 749 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 TRAP1Q12931 704 aaKnown RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 GLYATQ6IB77 296 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 ZNF280BQ86YH2 543 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 TSGA13Q96PP4 275 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 PTPN18Q99952 460 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 THUMPD3Q9BV44 507 aaKnown RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 FAM124BQ9H5Z6 455 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 AGPAT4Q9NRZ5 378 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 GID8Q9NWU2 228 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 ANAPC2Q9UJX6 822 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SPO11Q9Y5K1 396 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 ASPDHA6ND91 283 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SNX2O60749 519 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 LDLRP01130 860 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 GSNP06396 782 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 CYP4B1P13584 511 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 AXLP30530 894 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SHMT2P34897 504 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 RPL26P61254 145 aaKnown RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 MS4A13Q5J8X5 152 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 GDF6Q6KF10 455 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 FAM45BPQ6NSW5 357 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 TIGD7Q6NT04 549 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 IL27RAQ6UWB1 636 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 BTLAQ7Z6A9 289 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 OR4L1Q8NH43 312 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 FNDC8Q8TC99 324 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 FAM45AQ8TCE6 357 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 EEF1AKMT1Q8WVE0 214 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 PGAP3Q96FM1 320 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 IMP4Q96G21 291 aaKnown RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 SEPT5Q99719 369 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 PRKD2Q9BZL6 878 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 VPS45Q9NRW7 570 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 CATSPERZQ9NTU4 200 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SLC38A7Q9NVC3 462 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 PTCH2Q9Y6C5 1203 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 UPK3BL1B0FP48 263 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 UPK3BL2E5RIL1 263 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 AP3B1O00203 1094 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 CHRNA1P02708 482 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 BMP2P12643 396 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 RGRP47804 291 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 KCNQ1P51787 676 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 C21orf59P57076 290 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 TIAL1Q01085 375 aaKnown RBP eCLIP15.93■□□□□ 0.14
DKC1-213ENST00000620277 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 MEP1AQ16819 746 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 ZBED5Q49AG3 693 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SLC44A4Q53GD3 710 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 LIMS2Q7Z4I7 341 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 ANKFN1Q8N957 763 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 TRPV3Q8NET8 790 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SDCCAG3Q96C92 435 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 AURKBQ96GD4 344 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 C17orf80Q9BSJ5 609 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 C9orf16Q9BUW7 83 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 SMPD3Q9NY59 655 aaPredicted RBP15.93■□□□□ 0.14
DKC1-213ENST00000620277 PADI3Q9ULW8 664 aa15.93■□□□□ 0.14
DKC1-213ENST00000620277 WDR90Q96KV7 1748 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 A0A1W2PQ67 120 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 NT5C1B-RDH14C9J2C7 533 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 RAMP2O60895 175 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 B3GALT4O96024 378 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 CCT8P50990 548 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 XKR4Q5GH76 650 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 ABRAXAS1Q6UWZ7 409 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 C16orf59Q7L2K0 433 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 GALNT5Q7Z7M9 940 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 TMEM86AQ8N2M4 240 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 LPCAT1Q8NF37 534 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 TMEM125Q96AQ2 219 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 ZNHIT2Q9UHR6 403 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 ST14Q9Y5Y6 855 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 ACOX3O15254 700 aa15.92■□□□□ 0.14
DKC1-213ENST00000620277 NOL3O60936 208 aaKnown RBP15.92■□□□□ 0.14
DKC1-213ENST00000620277 SLC22A3O75751 556 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms