RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ADAMTS14Q8WXS8 1223 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GLMNQ92990 594 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KLHDC7BQ96G42 594 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SGSM3Q96HU1 749 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 BMFQ96LC9 184 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 FCRL5Q96RD9 977 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KLF6Q99612 283 aaPredicted RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MYOCQ99972 504 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 C19orf43Q9BQ61 176 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 APOL2Q9BQE5 337 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 C1QTNF2Q9BXJ5 285 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 SLC17A9Q9BYT1 436 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MIR1-1HGQ9H1L0 117 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PCDH9Q9HC56 1237 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PPANQ9NQ55 473 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 MBNL1Q9NR56 388 aaKnown RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 GPR27Q9NS67 375 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KLC4Q9NSK0 619 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 KLHL8Q9P2G9 620 aaPredicted RBP5.24□□□□□ -1.57
SHMT1-211ENST00000618902 DKK4Q9UBT3 224 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 TRHDEQ9UKU6 1024 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 PCOLCE2Q9UKZ9 415 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 NEUROG3Q9Y4Z2 214 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 CAPN7Q9Y6W3 813 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ADAMTS9Q9P2N4 1935 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 LOC400499M0QZD8 3231 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 ZFYVE26Q68DK2 2539 aa5.24□□□□□ -1.57
SHMT1-211ENST00000618902 COL5A1P20908 1838 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SPTY2D1-AS1A0A0U1RR47 76 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 A0A1B0GVT2 93 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 POM121BA6NF01 834 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD66B4E2M5 251 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 K7ESM1 405 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 NEMP1O14524 444 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TNFRSF10CO14798 259 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CDH16O75309 829 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TM7SF2O76062 418 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PCDH8O95206 1070 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TTC4O95801 387 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 NDST3O95803 873 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PAK4O96013 591 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 IFNB1P01574 187 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ITGAVP06756 1048 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 C6P13671 934 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CD59P13987 128 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 EZRP15311 586 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF30P17039 623 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 XPAP23025 273 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ALDH3A1P30838 453 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 VIPR1P32241 457 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CA5AP35218 305 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 IGFALSP35858 605 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 RPIAP49247 311 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CSNK1EP49674 416 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 LIG3P49916 1009 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 NOVA1P51513 510 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 STC1P52823 247 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 E2F1Q01094 437 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PTSQ03393 145 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CDK18Q07002 472 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 IFT88Q13099 833 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PTK6Q13882 451 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SLC29A2Q14542 456 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PTPRCAPQ14761 206 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PPP1R7Q15435 360 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TRIP13Q15645 432 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 UAP1Q16222 522 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CLPPQ16740 277 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 KIF19Q2TAC6 998 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 WSCD2Q2TBF2 565 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SIRPB2Q5JXA9 342 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PRAMEF14Q5SWL7 426 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 RNF187Q5TA31 235 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD22Q5VYY1 191 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ZDHHC20Q5W0Z9 365 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 LRRC66Q68CR7 880 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PSAPL1Q6NUJ1 521 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 FOXR1Q6PIV2 292 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 RANBP10Q6VN20 620 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 GCNT7Q6ZNI0 430 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 Q6ZVL8 140 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TECPR1Q7Z6L1 1165 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PACS2Q86VP3 889 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TMPRSS12Q86WS5 348 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TDRPQ86YL5 185 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 GSPT2Q8IYD1 628 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SLC22A18ASQ8N1D0 253 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SLC25A41Q8N5S1 370 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TP53I13Q8NBR0 393 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PLA2G15Q8NCC3 412 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 LPCAT1Q8NF37 534 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 IPMKQ8NFU5 416 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 BAHD1Q8TBE0 780 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 DTX3LQ8TDB6 740 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CXorf40AQ8TE69 158 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SCG3Q8WXD2 468 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CCT6BQ92526 530 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SNX19Q92543 992 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SCRN2Q96FV2 425 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms