RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CEACAM7Q14002 265 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 PABPC1LQ4VXU2 614 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 GALNT7Q86SF2 657 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TSPAN33Q86UF1 283 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ITIH5Q86UX2 942 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 PEX13Q92968 403 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TUBGCP3Q96CW5 907 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TCEAL4Q96EI5 215 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 MAELQ96JY0 434 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 ZNF385DQ9H6B1 395 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 EFCAB1Q9HAE3 211 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ABCB8Q9NUT2 735 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 INTS10Q9NVR2 710 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 OR51B4Q9Y5P0 310 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 CEP290O15078 2479 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 SNUPNO95149 360 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 PRAMEF1O95521 474 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ATP6V1C1P21283 382 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 CCR2P41597 374 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TTPAP49638 278 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 CLCQ05315 142 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 BCL2L1Q07817 233 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 GRB7Q14451 532 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 PLPP4Q5VZY2 271 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ISLR2Q6UXK2 745 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 TWIST2Q8WVJ9 160 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 ALG14Q96F25 216 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ACOX2Q99424 681 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 C2orf49Q9BVC5 232 aaPredicted RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 TRIM8Q9BZR9 551 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ASB8Q9H765 288 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 MEAF6Q9HAF1 191 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 IL17CQ9P0M4 197 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
CIITA-212ENST00000618207 INTS6Q9UL03 887 aaKnown RBP12.32□□□□□ -0.44
CIITA-212ENST00000618207 HIDE1A8MVS5 230 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 TRIM24O15164 1050 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 PYGLP06737 847 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 ALDOCP09972 364 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 PRDX6P30041 224 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 FLOT2Q14254 428 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 RBBP7Q16576 425 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 RETSATQ6NUM9 610 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 C16orf89Q6UX73 402 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 KIAA1191Q96A73 305 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 MRPL1Q9BYD6 325 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 PCDHAC1Q9H158 963 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 RC3H2Q9HBD1 1191 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 ZFYVE1Q9HBF4 777 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 SLC4A7Q9Y6M7 1214 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 AZIN1O14977 448 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 PEX2P28328 305 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 HK2P52789 917 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 IL2P60568 153 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 TRIP10Q15642 601 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 DGKKQ5KSL6 1271 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 PTRHD1Q6GMV3 140 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 ANO7Q6IWH7 933 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 Q6ZNB5 142 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 SERPINA9Q86WD7 417 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 CLYBLQ8N0X4 340 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 PELI3Q8N2H9 469 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 CPSF7Q8N684 471 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 NAT16Q8N8M0 369 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 KREMEN2Q8NCW0 462 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 CD200R1Q8TD46 325 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 L3HYPDHQ96EM0 354 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 TUBB1Q9H4B7 451 aa12.31□□□□□ -0.44
CIITA-212ENST00000618207 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 EIF2B4Q9UI10 523 aaKnown RBP12.31□□□□□ -0.44
CIITA-212ENST00000618207 GBF1Q92538 1859 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 LEFTY2O00292 366 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SNX2O60749 519 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 KERAO60938 352 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 KATNA1O75449 491 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 PGLSO95336 258 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 HK3P52790 923 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 ERVFC1P60507 584 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 XIAPP98170 497 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 CREB5Q02930 508 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 PTK2BQ14289 1009 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 INO80DQ53TQ3 878 aaPredicted RBP12.3□□□□□ -0.44
CIITA-212ENST00000618207 RFLNAQ6ZTI6 216 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 ZSWIM9Q86XI8 627 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms