RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 BLACEA4D250 179 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 LRRC53A6NM62 1247 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 STMND1H3BQB6 276 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 INSIG1O15503 277 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 TEX33O43247 280 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SLU7O95391 586 aaKnown RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 PRKCGP05129 697 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 HNRNPCP07910 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
GPC6-202ENST00000617456 HOXC4P09017 264 aaPredicted RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 TROVE2P10155 538 aaKnown RBP eCLIP8.54□□□□□ -1.04
GPC6-202ENST00000617456 GLB1P16278 677 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 PSMA2P25787 234 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 CD82P27701 267 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 CCR10P46092 362 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 TPI1P60174 286 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RHOAP61586 193 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 IL10RBQ08334 325 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 KLHL30Q0D2K2 578 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 PIGHQ14442 188 aaPredicted RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 ASIC2Q16515 512 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 DPYSL2Q16555 572 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 UGP2Q16851 508 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 C14orf28Q4W4Y0 310 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RAB6CQ53S08 254 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SH2D4BQ5SQS7 431 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SPECC1LQ69YQ0 1117 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 HIST2H2BCQ6DN03 193 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 ERAP2Q6P179 960 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 NEK10Q6ZWH5 1172 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SLITRK4Q8IW52 837 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RAVER1Q8IY67 606 aaKnown RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 ZBTB8BQ8NAP8 495 aaPredicted RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 RCBTB1Q8NDN9 531 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 PPP1R14CQ8TAE6 165 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 OR1E3Q8WZA6 343 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 HMCESQ96FZ2 354 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 WDR92Q96MX6 357 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 PSKH2Q96QS6 385 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 CGREF1Q99674 301 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RAB6CQ9H0N0 254 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SUV39H2Q9H5I1 410 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 ATP13A3Q9H7F0 1226 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 L2HGDHQ9H9P8 463 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RDH14Q9HBH5 336 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 MRPL40Q9NQ50 206 aaKnown RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 TCF7L2Q9NQB0 619 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 RCOR3Q9P2K3 495 aaPredicted RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 UBA2Q9UBT2 640 aaPredicted RBP8.54□□□□□ -1.04
GPC6-202ENST00000617456 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 APPL1Q9UKG1 709 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 AP4E1Q9UPM8 1137 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 SDK2Q58EX2 2172 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 DOCK4Q8N1I0 1966 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 UTP20O75691 2785 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 EEF2KO00418 725 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 DAPK3O43293 454 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PIGNO95427 931 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 SERPINC1P01008 464 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CCDC166P0CW27 439 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PRKAR1AP10644 381 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 LIFP15018 202 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CD53P19397 219 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CES1P23141 567 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 SERPINA4P29622 427 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 ALDH4A1P30038 563 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CASRP41180 1078 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 MAZP56270 477 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 OR1D5P58170 312 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 AP1S1P61966 158 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 OGDHQ02218 1023 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 HLTFQ14527 1009 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPC6-202ENST00000617456 CYTH1Q15438 398 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 INAQ16352 499 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 THOC7Q6I9Y2 204 aaKnown RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 OGFOD3Q6PK18 319 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 TMCO3Q6UWJ1 677 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 ZNF571Q7Z3V5 609 aaPredicted RBP8.53□□□□□ -1.04
GPC6-202ENST00000617456 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PIM3Q86V86 326 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 PLA2G15Q8NCC3 412 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 TRIM58Q8NG06 486 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 CCL4L1Q8NHW4 92 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 FATE1Q969F0 183 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 NKD1Q969G9 470 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 ECHDC3Q96DC8 303 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 SPDL1Q96EA4 605 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 TAAR9Q96RI9 348 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 RBM15Q96T37 977 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPC6-202ENST00000617456 NUDT22Q9BRQ3 303 aa8.53□□□□□ -1.04
GPC6-202ENST00000617456 MAGEB5Q9BZ81 275 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms