RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ZNF771Q7L3S4 317 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 TECPR1Q7Z6L1 1165 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TRIM69Q86WT6 500 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 LCN9Q8WX39 176 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 NINJ1Q92982 152 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 C19orf60Q96EN9 201 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TM7SF3Q9NS93 570 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TMEM131Q92545 1883 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 A8MU76 341 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 H3BQF6 201 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PPEF2O14830 753 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 KLRC4O43908 158 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PRPS2P11908 318 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 MNDAP41218 407 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PLA2G4EQ3MJ16 856 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ZCCHC12Q6PEW1 402 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 NANOGNBQ7Z5D8 188 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PASD1Q8IV76 773 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 CACTIN-AS1Q8N1I8 211 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 DPP10Q8N608 796 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 Q8N9G6 341 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 PPP1R35Q8TAP8 253 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SPATA20Q8TB22 786 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SARAFQ96BY9 339 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ELOVL6Q9H5J4 265 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 MRPS30Q9NP92 439 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 ATP13A2Q9NQ11 1180 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 HCN2Q9UL51 889 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 BUB1BO60566 1050 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 KRT6AP02538 564 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 KRT6BP04259 564 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PCSK2P16519 638 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ITPKBP27987 946 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 RRM2P31350 389 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 BMP8BP34820 402 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 KRT6CP48668 564 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 MAPKAPK2P49137 400 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 CDH4P55283 916 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 VSNL1P62760 191 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 RSPO4Q2I0M5 234 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 EIF2S3LQ2VIR3 472 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 POTEGQ6S5H5 508 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 GK5Q6ZS86 529 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 NT5DC3Q86UY8 548 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 C17orf64Q86WR6 236 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 METTL25Q8N6Q8 603 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SAAL1Q96ER3 474 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ACBD6Q9BR61 282 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 BLACEA4D250 179 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 F8VP50 259 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ECI2O75521 394 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 LARGE1O95461 756 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ATF4P18848 351 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 FDXRP22570 491 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 MTX1Q13505 466 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 CAMK2DQ13557 499 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 CSHL1Q14406 222 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 RAP1GAP2Q684P5 730 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PDPRQ8NCN5 879 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 OR8K5Q8NH50 307 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TMEM171Q8WVE6 324 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 ELSPBP1Q96BH3 223 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 THTPAQ9BU02 230 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TBL1XR1Q9BZK7 514 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PREBQ9HCU5 417 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 SPATS2LQ9NUQ6 558 aaKnown RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 CUEDC1Q9NWM3 386 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 WNT16Q9UBV4 365 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 VANGL2Q9ULK5 521 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 TTC7AQ9ULT0 858 aaPredicted RBP3.34□□□□□ -1.88
LPP-220ENST00000617246 CAMK2AQ9UQM7 478 aa3.34□□□□□ -1.88
LPP-220ENST00000617246 PVALEFA0A1B0GWK0 134 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TRIM64BA6NI03 449 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SCAMP1O15126 338 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LSM8O95777 96 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 RPS3P23396 243 aaKnown RBP eCLIP3.33□□□□□ -1.882e-6■■□□□ 14.1
LPP-220ENST00000617246 SERPINB9P50453 376 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NDST2P52849 883 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ADIGQ0VDE8 80 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TROAPQ12815 778 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RIN1Q13671 783 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CRY2Q49AN0 593 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CHSY3Q70JA7 882 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FGD2Q7Z6J4 655 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TP53INP2Q8IXH6 220 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FAM133AQ8N9E0 248 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TXNDC5Q8NBS9 432 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 OR2AJ1Q8NGZ0 328 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 OR2T3Q8NH03 318 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CLP1Q92989 425 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 RHBGQ9H310 441 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NT5MQ9NPB1 228 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CPQQ9Y646 472 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 F5H423 210 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 BCAS2O75934 225 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 ZNF28P17035 718 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PHLDB3Q6NSJ2 640 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TMEM53Q6P2H8 277 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 KIAA0319LQ8IZA0 1049 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms