RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CROCCP2Q86T23 111 aa8.78□□□□□ -1
VPS11-206ENST00000614944 CCDC36Q8IYA8 594 aa8.78□□□□□ -1
VPS11-206ENST00000614944 LPGAT1Q92604 370 aa8.78□□□□□ -1
VPS11-206ENST00000614944 EDEM1Q92611 657 aa8.78□□□□□ -1
VPS11-206ENST00000614944 MARC2Q969Z3 335 aa8.78□□□□□ -1
VPS11-206ENST00000614944 ANLNQ9NQW6 1124 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DIABLOQ9NR28 239 aa8.78□□□□□ -1
VPS11-206ENST00000614944 OR12D3Q9UGF7 316 aa8.78□□□□□ -1
VPS11-206ENST00000614944 A0A1W2PPC1 479 aa8.78□□□□□ -1
VPS11-206ENST00000614944 A0A1W2PQ72 361 aa8.78□□□□□ -1
VPS11-206ENST00000614944 TLDC2A0PJX2 215 aa8.78□□□□□ -1
VPS11-206ENST00000614944 PRR23AA6NEV1 266 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DNALI1O14645 258 aaPredicted RBP8.78□□□□□ -1
VPS11-206ENST00000614944 PRRG1O14668 218 aa8.78□□□□□ -1
VPS11-206ENST00000614944 CACNG3O60359 315 aa8.78□□□□□ -1
VPS11-206ENST00000614944 TLR5O60602 858 aa8.78□□□□□ -1
VPS11-206ENST00000614944 PAGE1O75459 146 aa8.78□□□□□ -1
VPS11-206ENST00000614944 ITGALP20701 1170 aa8.78□□□□□ -1
VPS11-206ENST00000614944 ATXN1P54253 815 aaKnown RBP8.78□□□□□ -1
VPS11-206ENST00000614944 SLC12A2P55011 1212 aa8.78□□□□□ -1
VPS11-206ENST00000614944 TPI1P60174 286 aa8.78□□□□□ -1
VPS11-206ENST00000614944 ERVFC1P60507 584 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DLG1Q12959 904 aa8.78□□□□□ -1
VPS11-206ENST00000614944 NME3Q13232 169 aa8.78□□□□□ -1
VPS11-206ENST00000614944 CAMK1Q14012 370 aa8.78□□□□□ -1
VPS11-206ENST00000614944 OXA1LQ15070 435 aa8.78□□□□□ -1
VPS11-206ENST00000614944 TBRG1Q3YBR2 411 aa8.78□□□□□ -1
VPS11-206ENST00000614944 PPM1LQ5SGD2 360 aa8.78□□□□□ -1
VPS11-206ENST00000614944 POMZP3Q6PJE2 187 aa8.78□□□□□ -1
VPS11-206ENST00000614944 TSPYL5Q86VY4 417 aaPredicted RBP8.78□□□□□ -1
VPS11-206ENST00000614944 STX12Q86Y82 276 aa8.78□□□□□ -1
VPS11-206ENST00000614944 HID1Q8IV36 788 aa8.78□□□□□ -1
VPS11-206ENST00000614944 RTL3Q8N8U3 475 aaKnown RBP8.78□□□□□ -1
VPS11-206ENST00000614944 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
VPS11-206ENST00000614944 OR6P1Q8NGX9 317 aa8.78□□□□□ -1
VPS11-206ENST00000614944 C1orf54Q8WWF1 131 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DEPDC7Q96QD5 511 aa8.78□□□□□ -1
VPS11-206ENST00000614944 NUSAP1Q9BXS6 441 aaKnown RBP8.78□□□□□ -1
VPS11-206ENST00000614944 OR2B2Q9GZK3 357 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DZANK1Q9NVP4 752 aa8.78□□□□□ -1
VPS11-206ENST00000614944 PAK5Q9P286 719 aa8.78□□□□□ -1
VPS11-206ENST00000614944 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
VPS11-206ENST00000614944 ADGRE2Q9UHX3 823 aa8.78□□□□□ -1
VPS11-206ENST00000614944 DIMT1Q9UNQ2 313 aaKnown RBP8.78□□□□□ -1
VPS11-206ENST00000614944 FARP1Q9Y4F1 1045 aaPredicted RBP8.78□□□□□ -1
VPS11-206ENST00000614944 TP73O15350 636 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 NUAK1O60285 661 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 GOT1P17174 413 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 ITIH1P19827 911 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 OR3A3P47888 321 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 PGFP49763 221 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 RGS19P49795 217 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 ARPP19P56211 112 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 CDK16Q00536 496 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 SHHQ15465 462 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 SGCAQ16586 387 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 TNFAIP8L3Q5GJ75 292 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 AARS2Q5JTZ9 985 aaKnown RBP8.77□□□□□ -1.01
VPS11-206ENST00000614944 C6orf10Q5SRN2 563 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 Q6ZNB5 142 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MAMDC2Q7Z304 686 aaPredicted RBP8.77□□□□□ -1.01
VPS11-206ENST00000614944 CPXM2Q8N436 756 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MINDY2Q8NBR6 621 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 RANBP9Q96S59 729 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 CYTH2Q99418 400 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 BTBD10Q9BSF8 475 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MLPHQ9BV36 600 aaPredicted RBP8.77□□□□□ -1.01
VPS11-206ENST00000614944 ERVMER34-1Q9H9K5 563 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 KLHL11Q9NVR0 708 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 CHKBQ9Y259 395 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 VWA7Q9Y334 891 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MAGED1Q9Y5V3 778 aaPredicted RBP8.77□□□□□ -1.01
VPS11-206ENST00000614944 HS3ST4Q9Y661 456 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 F8W8V4 182 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 BTN3A1O00481 513 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 CHADO15335 359 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 GSC2O15499 205 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 PEX1O43933 1283 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 SERPINI2O75830 405 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 LRIG2O94898 1065 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 RABGGTBP53611 331 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 GALK2Q01415 458 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 DUSP6Q16828 381 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 SRRM1Q8IYB3 904 aaKnown RBP8.77□□□□□ -1.01
VPS11-206ENST00000614944 CITED4Q96RK1 184 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MIPEPQ99797 713 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 MROQ9BYG7 248 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 PRO3102Q9H379 93 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 ENTPD7Q9NQZ7 604 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 ACTR3BQ9P1U1 418 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 TRHDEQ9UKU6 1024 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 DENND4AQ7Z401 1863 aa8.77□□□□□ -1.01
VPS11-206ENST00000614944 FAM170AA1A519 330 aa8.76□□□□□ -1.01
VPS11-206ENST00000614944 E9PAM4 449 aa8.76□□□□□ -1.01
VPS11-206ENST00000614944 RASGRF2O14827 1237 aa8.76□□□□□ -1.01
VPS11-206ENST00000614944 GYG2O15488 501 aa8.76□□□□□ -1.01
VPS11-206ENST00000614944 COCHO43405 550 aa8.76□□□□□ -1.01
VPS11-206ENST00000614944 JRKO75564 520 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms