RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 VMP1Q96GC9 406 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 PCED1BQ96HM7 432 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 SCYL1Q96KG9 808 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 BCL7BQ9BQE9 202 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 RMND5AQ9H871 391 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 MTRRQ9UBK8 725 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 IFT52Q9Y366 437 aa21.83■■□□□ 1.09
POLR2J3-220ENST00000613744 TBC1D4O60343 1298 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 DLX3O60479 287 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 JRKO75564 520 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 RGS7P49802 495 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC7A2P52569 658 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC6A3Q01959 620 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 TNK2Q07912 1038 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 ANKRD13BQ86YJ7 626 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 TRPV3Q8NET8 790 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 ATXN7L3BQ96GX2 97 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 FBXL20Q96IG2 436 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 LRCH3Q96II8 777 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 AKIP1Q9NQ31 210 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 ACTR3BQ9P1U1 418 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 TRAF6Q9Y4K3 522 aa21.83■■□□□ 1.08
POLR2J3-220ENST00000613744 ABCB7O75027 752 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 NTRK1P04629 796 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 CNPP09543 421 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 EEF1DP29692 281 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 IDUAP35475 653 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 HPCAL1P37235 193 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 OPRL1P41146 370 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 LEPRP48357 1165 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 ARHGAP17Q68EM7 881 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 RNF19BQ6ZMZ0 732 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 MYLPFQ96A32 169 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 RHOJQ9H4E5 214 aa21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 INTS10Q9NVR2 710 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-220ENST00000613744 REV3LO60673 3130 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 A0A1W2PPC1 479 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 TTC24A2A3L6 582 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 TEX28O15482 410 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 PHGDHO43175 533 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 LILRB3O75022 631 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 TGM1P22735 817 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 PSMB4P28070 264 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 GSTM2P28161 218 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 RPS9P46781 194 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 KPNA2P52292 529 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 CD300CQ08708 224 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 IFRD2Q12894 506 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 ARL13BQ3SXY8 428 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 RBM48Q5RL73 367 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 BSPRYQ5W0U4 402 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 CES3Q6UWW8 571 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 CENPIQ92674 756 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 HPS1Q92902 700 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 PIWIL1Q96J94 861 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 PKMYT1Q99640 499 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 B3GNT5Q9BYG0 378 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 FANCEQ9HB96 536 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 MOV10Q9HCE1 1003 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 ABI2Q9NYB9 513 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 ZNF639Q9UID6 485 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 VANGL2Q9ULK5 521 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 AP4E1Q9UPM8 1137 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 RUVBL2Q9Y230 463 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 FAM171BQ6P995 826 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 KCNMB4Q86W47 210 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 FSTL5Q8N475 847 aaPredicted RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 ATAD1Q8NBU5 361 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 AGAP2Q99490 1192 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 KLHL25Q9H0H3 589 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 EML4Q9HC35 981 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC39A10Q9ULF5 831 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 OAZ3Q9UMX2 235 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 AURKCQ9UQB9 309 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 USP3Q9Y6I4 520 aa21.81■■□□□ 1.08
POLR2J3-220ENST00000613744 OR6C75A6NL08 312 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 ERI2A8K979 691 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 GPC4O75487 556 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 GRAP2O75791 330 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 ARCN1P48444 511 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 NPY2RP49146 381 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 UBE3AQ05086 875 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 SLC26A9Q7LBE3 791 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 RBM23Q86U06 439 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 ADGRG5Q8IZF4 528 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 TTC9BQ8N6N2 239 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 MRPL43Q8N983 215 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 PAPD5Q8NDF8 572 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 P2RY11Q96G91 374 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 BTN2A3PQ96KV6 586 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 KCTD15Q96SI1 283 aaPredicted RBP21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 CASS4Q9NQ75 786 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 CCDC167Q9P0B6 97 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 VWA7Q9Y334 891 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 BACE2Q9Y5Z0 518 aa21.8■■□□□ 1.08
POLR2J3-220ENST00000613744 PER2O15055 1255 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 UMPSP11172 480 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 BDNFP23560 247 aa21.79■■□□□ 1.08
POLR2J3-220ENST00000613744 KPNA1P52294 538 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms