RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CPSF6Q16630 551 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SPATS1Q496A3 300 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 NOMO2Q5JPE7 1267 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CAPSLQ8WWF8 208 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 UBE2E3Q969T4 207 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 NODALQ96S42 347 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SLC39A8Q9C0K1 460 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 TLE6Q9H808 572 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SIX4Q9UIU6 781 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 FAM234BA2RU67 622 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 QSOX1O00391 747 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 TLR5O60602 858 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CLDN11O75508 207 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 MAPKAPK2P49137 400 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 UBAP2Q5T6F2 1119 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CERS6Q6ZMG9 384 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CLEC20AQ6ZU45 233 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 AKAP14Q86UN6 197 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 EXOC2Q96KP1 924 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 HERPUD2Q9BSE4 406 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 VRTNQ9H8Y1 702 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ANGPTL1O95841 491 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 NTRK1P04629 796 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CYP4B1P13584 511 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 GSTM5P46439 218 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 RPS7P62081 194 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SNRPD1P62314 119 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ZNF33AQ06730 810 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 IL10RBQ08334 325 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 YAF2Q8IY57 180 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ST13P5Q8NFI4 369 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 MRPL48Q96GC5 212 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 VPS35Q96QK1 796 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 HDHD2Q9H0R4 259 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 PIGVQ9NUD9 493 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ZNF490Q9ULM2 529 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ERGIC3Q9Y282 383 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 MANSC4A6NHS7 340 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 GRIN3BO60391 1043 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ZBTB11O95625 1053 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 RFTN1Q14699 578 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CYP2A13Q16696 494 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 PITRM1Q5JRX3 1037 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SYPL2Q5VXT5 272 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 TRMT11Q7Z4G4 463 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 HJURPQ8NCD3 748 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 BRSK1Q8TDC3 778 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 ELMO1Q92556 727 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 LRRC3Q9BY71 257 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 XYLT2Q9H1B5 865 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SERHL2Q9H4I8 314 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SERHLQ9NQF3 203 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 STARD7Q9NQZ5 370 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 SNX10Q9Y5X0 201 aa10.85□□□□□ -0.67
CDC42EP3-206ENST00000611976 EI24O14681 340 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 AREL1O15033 823 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 FADS2O95864 444 aaKnown RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 NDUFA5Q16718 116 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 PRAMEF19Q5SWL8 479 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 SDHAF4Q5VUM1 108 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 PAGE2Q7Z2X7 111 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 ZNF557Q8N988 423 aaPredicted RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 PHF10Q8WUB8 498 aaKnown RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 QRFPRQ96P65 431 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 OSBPL2Q9H1P3 480 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 COQ6Q9Y2Z9 468 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 E7ENX8 843 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 IDH3BO43837 385 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 NCK1P16333 377 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 PROZP22891 400 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 GRK4P32298 578 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 SMIM11AP58511 58 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 CACNG1Q06432 222 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 TGM3Q08188 693 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 SMARCB1Q12824 385 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 RBM48Q5RL73 367 aaKnown RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 MARVELD2Q8N4S9 558 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 GLB1L3Q8NCI6 653 aaPredicted RBP10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 DNAJB8Q8NHS0 232 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 TMEM174Q8WUU8 243 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 CANT1Q8WVQ1 401 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 HPS1Q92902 700 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 HMCESQ96FZ2 354 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 OLFM1Q99784 485 aa10.84□□□□□ -0.67
CDC42EP3-206ENST00000611976 FNIP2Q9P278 1114 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms