RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ZNF840PA6NDX5 716 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 C16orf96A6NNT2 1141 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF839A8K0R7 811 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ATG13O75143 517 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SIN3BO75182 1162 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RFPL2O75678 378 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SIX3O95343 332 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PSMG1O95456 288 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CLDN7O95471 211 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PFKMP08237 780 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CNPP09543 421 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 TYRP14679 529 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 GSSP48637 474 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SERINC3Q13530 473 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ZBTB6Q15916 424 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ARSIQ5FYB1 569 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PPP4R4Q6NUP7 873 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PRMT9Q6P2P2 845 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CCDC81Q6ZN84 652 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 LRRC74BQ6ZQY2 392 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF598Q86UK7 904 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ARFGAP1Q8N6T3 406 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NPWQ8N729 165 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CEP19Q96LK0 163 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 APOLD1Q96LR9 279 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RAD9AQ99638 391 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 EBF4Q9BQW3 602 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SSU72Q9NP77 194 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 TMEM248Q9NWD8 314 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CLDND1Q9NY35 253 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NDOR1Q9UHB4 597 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 EIF2B4Q9UI10 523 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NDRG2Q9UN36 371 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PSMD13Q9UNM6 376 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ABCA3Q99758 1704 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PAPPAQ13219 1627 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 COL4A1P02462 1669 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CACNB4O00305 520 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 DCLK1O15075 740 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CYP7B1O75881 506 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CCNHP51946 323 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SLC7A2P52569 658 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 MRPS35P82673 323 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CARD16Q5EG05 197 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PIK3R6Q5UE93 754 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PIM3Q86V86 326 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ZC3HC1Q86WB0 502 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 BBS7Q8IWZ6 715 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RBM15BQ8NDT2 890 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 GSTCDQ8NEC7 633 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 OR9Q1Q8NGQ5 310 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RIN3Q8TB24 985 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ITFG1Q8TB96 612 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 VPS33AQ96AX1 596 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 C19orf60Q96EN9 201 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 LENG8Q96PV6 779 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 FERD3LQ96RJ6 166 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 LEF1Q9UJU2 399 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 POLR3HQ9Y535 204 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 DDX60LQ5H9U9 1706 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RP1L1Q8IWN7 2480 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 C15orf38-AP3S2A0A0A6YYH1 394 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 A0A1W2PQ67 120 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 LEFTY2O00292 366 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PRAMEF11O60813 436 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 OR4F21O95013 312 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 LDLRP01130 860 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PCCBP05166 539 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 AMD1P17707 334 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 RFC2P35250 354 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 CYP4F2P78329 520 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ALDH6A1Q02252 535 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NRF1Q16656 503 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 FBXO46Q6PJ61 603 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 TMEM220Q6QAJ8 160 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ARPINQ7Z6K5 226 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 TMPRSS11BQ86T26 416 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 GPR180Q86V85 440 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 MMAAQ8IVH4 418 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ULK2Q8IYT8 1036 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 KRT78Q8N1N4 520 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ZMIZ2Q8NF64 920 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 OR10G6Q8NH81 332 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NAT14Q8WUY8 206 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 TWIST2Q8WVJ9 160 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 EBF3Q9H4W6 596 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 PHPT1Q9NRX4 125 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 MTF2Q9Y483 593 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 M0QZQ0 153 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 ABLIM1O14639 778 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 NDUFS2O75306 463 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 DEAF1O75398 565 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 EPN2O95208 641 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 KCNH1O95259 989 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 GSTM1P09488 218 aa7.23□□□□□ -1.25
CSDE1-218ENST00000610726 OGNP20774 298 aaKnown RBP7.23□□□□□ -1.25
CSDE1-218ENST00000610726 IVDP26440 423 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms