RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 LOXL2Q9Y4K0 774 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 NFS1Q9Y697 457 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 OR2A25A4D2G3 310 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CLEC18AA5D8T8 446 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 LRRC72A6NJI9 287 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 A8MV72 311 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MAP2K7O14733 419 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 SMAD9O15198 467 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 ENTPD3O75355 529 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 KCNK5O95279 499 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 PGM3O95394 542 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF12P17014 697 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 NNMTP40261 264 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 FASLGP48023 281 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 TAS2R38P59533 333 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MYBPHQ13203 477 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 KCNC3Q14003 757 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 DECR1Q16698 335 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 KCNT1Q5JUK3 1230 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MFSD4BQ5TF39 518 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CCNI2Q6ZMN8 369 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 USP43Q70EL4 1123 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CCDC190Q86UF4 302 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 EPHX4Q8IUS5 362 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 SCYL3Q8IZE3 742 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 IL17RCQ8NAC3 791 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CLEC18CQ8NCF0 446 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 HMGCLL1Q8TB92 370 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 TAAR8Q969N4 342 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 RHBDF1Q96CC6 855 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 C3orf30Q96M34 536 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MTERF1Q99551 399 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CMKLR1Q99788 373 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 TMEM204Q9BSN7 226 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CENPOQ9BU64 300 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 TMEM39BQ9GZU3 492 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 GIMAP4Q9NUV9 329 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 PAG1Q9NWQ8 432 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 ARHGEF38Q9NXL2 777 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MCM9Q9NXL9 1143 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 CLIC5Q9NZA1 410 aa4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 MRPL15Q9P015 296 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 EXO1Q9UQ84 846 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 PTRH2Q9Y3E5 179 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-213ENST00000609587 PASKQ96RG2 1323 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 IGLV5-37A0A075B6J1 123 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 PAPSS1O43252 624 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 RFPL2O75678 378 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 CLDN14O95500 239 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 FCGR1AP12314 374 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 MMP9P14780 707 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 APOBEC1P41238 236 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 RRP1P56182 461 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 IFI35P80217 286 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 LTBQ06643 244 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 BECN1Q14457 450 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 NFATC4Q14934 902 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 PCLAFQ15004 111 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 NSUN5P2Q63ZY6 315 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 FAM122CQ6P4D5 195 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 RHBDF2Q6PJF5 856 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 GALNT5Q7Z7M9 940 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 SCML4Q8N228 414 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF114Q8NC26 417 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 NEUROG1Q92886 237 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 LRRC59Q96AG4 307 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 SLC22A18Q96BI1 424 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 SCMH1Q96GD3 660 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF479Q96JC4 524 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 FIZ1Q96SL8 496 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 HIPK2Q9H2X6 1198 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 OSGEPL1Q9H4B0 414 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 PCDH9Q9HC56 1237 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 NKIRAS2Q9NYR9 191 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 C1RLQ9NZP8 487 aa4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 DBNLQ9UJU6 430 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF644Q9H582 1327 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 A0A1W2PR77 199 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 KCNN4O15554 427 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 TIMM44O43615 452 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 ERAL1O75616 437 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 DDNO94850 711 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 KDM4BO94953 1096 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 CENPBP07199 599 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 NGFRP08138 427 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 NR2F1P10589 423 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 MMP14P50281 582 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 TUBA1BP68363 451 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PDE1BQ01064 536 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF155Q12901 538 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 TNFAIP1Q13829 316 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 DLG2Q15700 870 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 C18orf63Q68DL7 685 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PAPD4Q6PIY7 484 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 BRAT1Q6PJG6 821 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 TMCO3Q6UWJ1 677 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms