RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CCDC138Q96M89 665 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 ZNF599Q96NL3 588 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 TMEM209Q96SK2 561 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 LHPPQ9H008 270 aa22.23■■□□□ 1.15
SHANK2-220ENST00000608988 SYNCRIPO60506 623 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ALPLP05186 524 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ZNF37AP17032 561 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 OGNP20774 298 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 YAP1P46937 504 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 POLR2JP52435 117 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 FOXA1P55317 472 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 PFKFB4Q16877 469 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 XKR7Q5GH72 579 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ARTNQ5T4W7 220 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ANKS6Q68DC2 871 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 NEK10Q6ZWH5 1172 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 IFNEQ86WN2 208 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 KIAA2013Q8IYS2 634 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 PARP8Q8N3A8 854 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 OR52K2Q8NGK3 314 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 STAG3L4Q8TBR4 150 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 SLC35B4Q969S0 331 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ISG20Q96AZ6 181 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 BTN2A3PQ96KV6 586 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ZNF641Q96N77 438 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 FEM1AQ9BSK4 669 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 TSPYL2Q9H2G4 693 aaPredicted RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 SYTL2Q9HCH5 934 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 GIMAP2Q9UG22 337 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 TMED5Q9Y3A6 229 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 CORINQ9Y5Q5 1042 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 PTGDR2Q9Y5Y4 395 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 C1orf232A0A0U1RR37 186 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 J3QRK9 145 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 STX16O14662 325 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ADAM23O75077 832 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 RPS17P08708 135 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 UROSP10746 265 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 NCK1P16333 377 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 RABGGTBP53611 331 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ERVK-8P63133 956 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ITGADQ13349 1161 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 OXA1LQ15070 435 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 OR4D1Q15615 310 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 EML3Q32P44 896 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 FAM98BQ52LJ0 330 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 PIM3Q86V86 326 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 SPARTQ8N0X7 666 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 ARRDC4Q8NCT1 418 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 OR6J1Q8NGC5 347 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 SDCCAG3Q96C92 435 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 FBXL8Q96CD0 374 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 RNF145Q96MT1 663 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 PSD2Q9BQI7 771 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 SMOC2Q9H3U7 446 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 NTN4Q9HB63 628 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 TRNAU1APQ9NX07 287 aaKnown RBP22.22■■□□□ 1.15
SHANK2-220ENST00000608988 USE1Q9NZ43 259 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 DOLKQ9UPQ8 538 aa22.22■■□□□ 1.15
SHANK2-220ENST00000608988 NYNRINQ9P2P1 1898 aaKnown RBP22.21■■□□□ 1.15
SHANK2-220ENST00000608988 SYCE1LA8MT33 242 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 UPK1AO00322 258 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 MLYCDO95822 493 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 GLP2RO95838 553 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 PEX11BO96011 259 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 UGT2B4P06133 528 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 HOXB6P17509 224 aaKnown RBP22.21■■□□□ 1.15
SHANK2-220ENST00000608988 ELK4P28324 431 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 SHMT2P34897 504 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 PLA2G16P53816 162 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 PAGE3Q5JUK9 113 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 TXNDC11Q6PKC3 985 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 TBPL2Q6SJ96 375 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 ABHD11Q8NFV4 315 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 MUL1Q969V5 352 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 TADA1Q96BN2 335 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 FCRL2Q96LA5 508 aaPredicted RBP22.21■■□□□ 1.15
SHANK2-220ENST00000608988 DERL2Q9GZP9 239 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 ABCC13Q9NSE7 274 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 COMMD8Q9NX08 183 aa22.21■■□□□ 1.15
SHANK2-220ENST00000608988 MIA3Q5JRA6 1907 aa22.2■■□□□ 1.15
SHANK2-220ENST00000608988 TRIM43BA6NCK2 446 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 TBC1D4O60343 1298 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SNX2O60749 519 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SIX3O95343 332 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 C1RP00736 705 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ANXA6P08133 673 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SMIM10L2AP0DMW4 78 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SMIM10L2BP0DMW5 78 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ITIH1P19827 911 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 BDNFP23560 247 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 EEF1DP29692 281 aaKnown RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 GRIK1P39086 918 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 BTG3Q14201 252 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 GLYATQ6IB77 296 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ZNF549Q6P9A3 640 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 KDELC2Q7Z4H8 507 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 UMODL1-AS1Q8N2C9 162 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SVOPLQ8N434 492 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 FBXO39Q8N4B4 442 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms